A light-weight wrapper library around Spotify's Luigi workflow library to make writing scientific workflows more fluent, flexible and modular
☆335Dec 10, 2024Updated last year
Alternatives and similar repositories for sciluigi
Users that are interested in sciluigi are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Utils around luigi.☆66Aug 22, 2025Updated 7 months ago
- Robust, flexible and resource-efficient pipelines using Go and the commandline☆1,116Aug 14, 2024Updated last year
- Send summary messages of your Luigi jobs to Slack☆46Apr 25, 2019Updated 6 years ago
- deploy Dask.distributed to GridEngine (sge/pbs) cluster systems☆21Jan 11, 2017Updated 9 years ago
- A WDL, CWL and Python API supporting easy-to-use workflow engine. It is scalable, efficient and cross-platform (Linux/macOS).☆927Mar 19, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, vis…☆18,705Mar 18, 2026Updated last week
- TheSparkBox is an all-in-one Spark deployment that you can use to fire up a local cluster.☆12Jun 26, 2018Updated 7 years ago
- Tasks around metadata.☆21Mar 12, 2026Updated 2 weeks ago
- A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin☆6,559Mar 16, 2026Updated 2 weeks ago
- Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊☆1,482Jan 8, 2026Updated 2 months ago
- An experimental repo for common snakemake rules and workflows☆46Mar 17, 2015Updated 11 years ago
- Bio3D an HTML5 visualization tool for biological datasets☆25May 31, 2020Updated 5 years ago
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Sep 6, 2016Updated 9 years ago
- A tool for running bioinformatics workflows locally or in the cloud.☆30Dec 13, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- *luigi-gcloud* is an luigi extension that enables full support for the Google Cloud Platform. Making it possible to do complex orchestrat…☆43May 13, 2016Updated 9 years ago
- Pinball is a scalable workflow manager☆1,045Dec 10, 2019Updated 6 years ago
- Luigi pipelines and Dockerized apps for bioinformatics and data science☆11Oct 2, 2018Updated 7 years ago
- a Graph database and R package for omic data integration☆19Oct 28, 2016Updated 9 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆99Apr 9, 2023Updated 2 years ago
- A DSL for data-driven computational pipelines☆3,336Updated this week
- A time task management framework, support multiple projects, built on top of luigi.☆38Jul 31, 2015Updated 10 years ago
- Tool to easily start up an IPython cluster on different schedulers.☆146May 1, 2020Updated 5 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Sep 20, 2023Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- High throughput, pain-free big data pipelines.☆30Mar 11, 2017Updated 9 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Dec 10, 2024Updated last year
- An in depth tutorial on sklearn's Pipeline and FeatureUnion classes.☆16May 5, 2017Updated 8 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Mar 11, 2019Updated 7 years ago
- RNA-Seq Snakemake example with Jekyll homepage creation☆20Feb 20, 2014Updated 12 years ago
- Common Workflow Language reference implementation☆365Mar 15, 2026Updated 2 weeks ago
- See the main fork of this repository here >>>☆39Mar 9, 2026Updated 2 weeks ago
- Deploy Dask on job schedulers like PBS, SLURM, and SGE☆255Dec 19, 2025Updated 3 months ago
- MDAnalysis Tutorial at the 2015 CECAM Macromolecular simulation software workshop☆13Jul 22, 2016Updated 9 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- 🚧⛔ Tools help with continuous integration on services such as travis-ci and appveyor. (mostly replaced by conda-smithy)☆14Jun 20, 2018Updated 7 years ago
- Bioinformatics tool outputs converter to JSON or YAML☆35Jun 11, 2025Updated 9 months ago
- A project to help develop Luigi pipelines using Docker ✳️☆80Apr 21, 2021Updated 4 years ago
- Bpipe - a tool for running and managing bioinformatics pipelines☆239Mar 6, 2026Updated 3 weeks ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Aug 9, 2018Updated 7 years ago
- Build large-scale task workflows: luigi + job submission + remote targets + environment sandboxing using Docker/Singularity☆111Updated this week
- CGAT-ruffus is a lightweight python module for running computational pipelines☆175Jul 12, 2021Updated 4 years ago