pgarrett-scripps / peptacular
A spectacularly simple package for working with peptide sequences.
☆10Updated 3 weeks ago
Alternatives and similar repositories for peptacular:
Users that are interested in peptacular are comparing it to the libraries listed below
- ML models to convert molecules to ESI mass spectra and maybe back again☆9Updated 3 years ago
- a *biosynformatic* fingerprint to explore natural product distance and diversity☆18Updated last week
- ☆15Updated 3 years ago
- Curated list on Deep Transformers Applications on Biology and Chemistry☆18Updated 2 years ago
- ☆24Updated 3 years ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆26Updated 2 months ago
- Ligand binding site prediction and virtual screening☆12Updated 6 years ago
- MEGADOCK on Google Colaboratory☆16Updated last year
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆25Updated 6 months ago
- Python implementation of the FR3D software for searching and annotating RNA 3D structures☆18Updated last month
- ☆26Updated 8 months ago
- ☆28Updated 11 months ago
- a python package for molecular formula analysis in MS-based small molecule studies☆27Updated 2 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆27Updated last year
- Dockerized Version of the DiffDock model from MIT☆13Updated last year
- A database of In-Silico predicted MS/MS spectrum of Natural Products☆14Updated 2 years ago
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆13Updated 3 weeks ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆41Updated 2 years ago
- Voronota is a software tool for analyzing three-dimensional structures of biological macromolecules using the Voronoi diagram of atomic b…☆33Updated last week
- Generate Dose-Response Curves in Python☆9Updated 3 months ago
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆7Updated last year
- A collection of tools that generate and analyse side-chain rotamer libraries☆10Updated this week
- Pocket to Concavity is a tool for refinement of Protein-Ligand binding site shape from alpha-spheres☆16Updated 6 months ago
- PyMOL Plugin for displaying polar contacts☆17Updated 6 years ago
- ☆15Updated 2 years ago
- Python package to manage protein structures and their annotations☆42Updated last year
- Direct-to-SVG small molecule drawer.☆24Updated 2 months ago
- A DDG benchmark capture containing the benchmark dataset and benchmarked protocol captures.☆17Updated 9 years ago
- Explicit crosslinks in AlphaFold 3☆21Updated last month
- A web app to convert a PyMOL PSE file or PDB file to a easy to implement NGL.js view that can be implemented easily on any site☆12Updated 3 years ago