Alternatives and similar repositories for biorxiv-sanity-preserver

Users that are interested in biorxiv-sanity-preserver are comparing it to the libraries listed below

• kgayvert / PrOCTOR
  A Data-Driven Approach to Predicting Successes and Failures of Clinical Trials
  ☆18Updated 5 years ago
• p-koo / deepomics
  deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis
  ☆23Updated 2 years ago
• Future-House / BixBench
  Benchmark for LLM-based Agents in Computational Biology
  ☆40Updated last month
• okraus / DeepLoc
  This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…
  ☆50Updated 8 years ago
• gigascience / paper-bray2017
  Source code from Bray et al., (2017) A dataset of images and morphological profiles of 30,000 small-molecule treatments using the Cell Pa…
  ☆41Updated last year
• recursionpharma / rxrx-datasets
  READMEs for RxRx.ai datasets
  ☆26Updated 6 months ago
• tariqdaouda / FiberedAE
  Implementation of Fibered Auto-Encoders
  ☆9Updated 4 years ago
• sbl-sdsc / mmtf-genomics
  Methods for mapping genomic data onto 3D protein structure.
  ☆28Updated 3 years ago
• mcellteam / mcell
  MCell Monte Carlo Simulator of Cellular Microphysiology
  ☆35Updated last month
• blekhmanlab / rxivist
  API providing access to papers and authors scraped from biorxiv.org
  ☆57Updated 2 years ago
• VariantEffect / MaveDB
  MaveDB database web application
  ☆13Updated last year
• hetio / xswap
  Python library (C++ backend) for degree-preserving network randomization
  ☆14Updated 5 years ago
• exaexa / EmbedSOM
  Fast embedding ot multidimensional datasets, great for cytometry data
  ☆26Updated 4 months ago
• broadinstitute / lincs-cell-painting
  Processed Cell Painting Data for the LINCS Drug Repurposing Project
  ☆28Updated 2 years ago
• quantumjot / PyFolding
  Python framework for multi-parameter optimization and evaluation of protein folding models
  ☆17Updated 4 years ago
• KarrLab / intro_to_wc_modeling
  Whole-cell modeling tutorials
  ☆16Updated 4 years ago
• unlearnai / genemunge
  Tools for munging genomic data
  ☆21Updated 5 years ago
• sunericd / dynamicviz
  ☆61Updated 5 months ago
• ericmjl / flu-sequence-predictor
  An experimental deep learning & genotype network-based system for predicting new influenza protein sequences.
  ☆37Updated last year
• krassowski / multi-omics-state-of-the-field
  Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"
  ☆27Updated last year
• PathwayCommons / factoid
  A project to capture biological pathway data from academic papers
  ☆29Updated 2 months ago
• choderalab / assaytools
  Modeling and Bayesian analysis of fluorescence and absorbance assays.
  ☆18Updated 3 years ago
• ddofer / asap
  Amino-Acid Sequence Annotation Predictor (ASAP)
  ☆25Updated 5 years ago
• lujonathanh / BETS
  Bootstrap Elastic net regression from Time Series is a vector-autoregressive approach to causal inference from gene expression time serie…
  ☆20Updated 2 years ago
• scottyler89 / umap_tsne_experiment
  Testing if UMAP/tSNE overfit their intrinsic dimensionality
  ☆15Updated last year
• strateos / transcriptic
  Transcriptic CLI & Python Client Library
  ☆49Updated last year
• ocramz / jupyter-docker-pymol
  Container-based installation of pymol, with interaction through the browser via Jupyter notebook
  ☆20Updated 6 years ago
• pachterlab / CBP_2021
  ☆16Updated 3 years ago
• JinLi711 / UTGN
  Universal Transforming Geometric Network for protein structure prediction.
  ☆8Updated 4 years ago
• KrishnaswamyLab / graphtools
  Tools for building and manipulating graphs in Python
  ☆41Updated 2 years ago