CAMRIatUNC / RodentMRISkullStrippingLinks
U-Net based automatic Rat brain-mask Segmentation tool, developed by Hsu
☆16Updated 3 years ago
Alternatives and similar repositories for RodentMRISkullStripping
Users that are interested in RodentMRISkullStripping are comparing it to the libraries listed below
Sorting:
- ☆29Updated last year
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆31Updated last week
- Multi-task U-Net for the simultaneous segmentation and skull-stripping of mouse brain MRI☆22Updated 4 years ago
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆108Updated 9 months ago
- BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data☆47Updated 3 weeks ago
- List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data☆68Updated 2 years ago
- Tools for MRI mouse brain morphometry☆31Updated 8 years ago
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆31Updated last week
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆75Updated this week
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆71Updated this week
- A Python package providing I/O interface for Bruker data sets☆28Updated 3 months ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆52Updated last year
- Hongfu Sun's MATLAB codes for QSM reconstruction pipeline.☆78Updated 6 months ago
- DICOM to NIfTI conversion, NIfTI tools☆100Updated last month
- A set of tools for processing Quantitative MR Images☆63Updated 2 months ago
- MP2RAGE Scripts - T1 map correction & Background noise removal☆66Updated 2 years ago
- ☆28Updated 6 months ago
- MATLAB code for Multidimensional Diffusion MRI☆47Updated last week
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆52Updated last year
- The NIfTI-MRS data standard: specification, code, and example data.☆16Updated last year
- ☆18Updated last year
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆54Updated this week
- Automatic White Matter Bundle Segmentation☆248Updated last year
- Pre-trained models and utilities for deep learning on medical images in Python☆231Updated 2 months ago
- QSMxT is an end-to-end software toolbox for Quantitative Susceptibility Mapping.☆51Updated 3 weeks ago
- Toolbox for developing pipelines for analysis of spectroscopy data. Includes code for loading Siemens spectroscopy data, and for spectral…☆23Updated 4 months ago
- Matlab GUI pipeline application for quantitative susceptibility mapping (QSM)☆64Updated last month
- Quantitative MRI Made Easy with qMRLab: MRI software for data Simulation, analysis and visualization☆170Updated 2 months ago
- Code for magnetic susceptibility source separation☆29Updated last week
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆45Updated last week