Alternatives and similar repositories for MultiRat

Users that are interested in MultiRat are comparing it to the libraries listed below

• HumanBrainED / NHP-BrainExtraction
  ☆39Updated 3 years ago
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆98Updated last year
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆44Updated last week
• MidnightScanClub / MSCcodebase
  The Midnight Scanning Club Codebase
  ☆35Updated 6 years ago
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆36Updated 9 months ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆66Updated this week
• neurabenn / precon_all
  precon_all surface pipline
  ☆27Updated 2 months ago
• CMRR-C2P / MB
  Support for CMRR multi-band pulse sequences
  ☆59Updated 5 months ago
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆65Updated 8 months ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆42Updated last week
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 9 months ago
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆99Updated this week
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆69Updated last year
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 8 months ago
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆83Updated this week
• khanlab / hippunfold
  BIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)
  ☆59Updated last week
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆86Updated this week
• andersonwinkler / PALM
  PALM: Permutation Analysis of Linear Models
  ☆75Updated 2 months ago
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆100Updated last month
• bids-apps / MRtrix3_connectome
  Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…
  ☆52Updated last month
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆71Updated this week
• NeuroanatomyAndConnectivity / surfdist
  For calculating exact geodesic distances on cortical surface meshes
  ☆53Updated 11 months ago
• PennLINC / qsirecon
  Reconstruction of preprocessed q-space images (dMRI)
  ☆11Updated 2 weeks ago
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆160Updated this week
• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆55Updated 3 months ago
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆57Updated last year
• neurodata / neuroparc
  ☆192Updated 2 years ago
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆73Updated last week
• openneuropet / PET2BIDS
  PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…
  ☆30Updated last week