Alternatives and similar repositories for MultiRat:

Users that are interested in MultiRat are comparing it to the libraries listed below

• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆41Updated last week
• HumanBrainED / NHP-BrainExtraction
  ☆35Updated 3 years ago
• MidnightScanClub / MSCcodebase
  The Midnight Scanning Club Codebase
  ☆33Updated 5 years ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆69Updated this week
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆35Updated last month
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆60Updated 3 months ago
• pGarciaS / PREEMACS
  PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface
  ☆16Updated 11 months ago
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆38Updated 2 years ago
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆35Updated 5 months ago
• neurabenn / precon_all
  precon_all surface pipline
  ☆20Updated last week
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆35Updated last month
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 5 months ago
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆64Updated 5 months ago
• spinicist / nanslice
  A Python implementation of 'dual-coding'
  ☆41Updated last year
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆78Updated this week
• Washington-University / NHPPipelines
  Enhancements of HCP Pipelines for non-human primates
  ☆29Updated 2 years ago
• PRIME-RE / RheMAP
  Non-linear warps between common rhesus macaque brain templates
  ☆25Updated last year
• daducci / COMMIT
  Linear framework to combine tractography and tissue micro-structure estimation with diffusion MRI
  ☆46Updated last week
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆53Updated 2 weeks ago
• SteenMoeller / NORDIC_Raw
  Matlab code for performing image reconstruction in MRI and performing the NORDIC denoising
  ☆60Updated 6 months ago
• bids-apps / MRtrix3_connectome
  Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…
  ☆51Updated last year
• TingsterX / alignment_macaque-human
  cross-species alignment (joint-embedding between human and macaque)
  ☆26Updated 3 years ago
• ottaviadipasquale / react-fmri
  REACT: Receptor-Enriched Analysis of functional Connectivity by Targets
  ☆20Updated last year
• jordandekraker / Hippocampal_AutoTop
  ☆10Updated 3 years ago
• neurolabusc / nii_preprocess
  nii_preprocess adapted for LARC and ABC studies at UofSC
  ☆22Updated 3 years ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆72Updated 5 months ago
• CMRR-C2P / MB
  Support for CMRR multi-band pulse sequences
  ☆58Updated last month
• PRIME-RE / prime-re.github.io
  Open resource exchange platform for non-human primate neuroimaging
  ☆19Updated 2 weeks ago
• srikash / presurfer
  Scripts to prepare MP2RAGE for Freesurfer
  ☆27Updated last year
• aces / CIVET_Full_Project
  CIVET Installer
  ☆26Updated 3 years ago