nmpowell / mousemorph
Tools for MRI mouse brain morphometry
☆30Updated 8 years ago
Alternatives and similar repositories for mousemorph:
Users that are interested in mousemorph are comparing it to the libraries listed below
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆49Updated this week
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Updated 11 months ago
- Processing tools for high-resolution neuroimaging☆70Updated 2 months ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆62Updated this week
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆24Updated 3 weeks ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆46Updated 6 months ago
- Multiple Automatically Generated Templates brain segmentation algorithm☆48Updated 8 months ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆91Updated 3 months ago
- Gradient Unwarping in Python☆34Updated last month
- Preprocessing of diffusion MRI☆146Updated this week
- MP2RAGE Scripts - T1 map correction & Background noise removal☆54Updated last year
- Structural Neuroimaging Analysis in Python☆28Updated this week
- dMRI based fiber tracking using parallel transport tractography☆25Updated 2 weeks ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆91Updated last week
- DICOM to NIfTI conversion, NIfTI tools☆94Updated 6 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆65Updated last year
- U-Net based automatic Rat brain-mask Segmentation tool, developed by Hsu☆17Updated 3 years ago
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆92Updated 2 years ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆137Updated this week
- mrQ_BoxJoinBox☆22Updated last year
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆65Updated this week
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆43Updated 11 years ago
- ☆26Updated 9 months ago
- ☆34Updated 2 years ago
- atlasBREX: Automated averaged template-derived brain extraction in animal MRI☆16Updated last year
- Create realistic digital phantoms in diffusion MRI.☆33Updated last year
- 3D MRI data exploration and segmentation tool.☆74Updated last year
- niimath - a clone of fslmaths. Try the live demo:☆59Updated last month
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆30Updated last week
- defacing utility for MRI images☆114Updated last year