nmpowell / mousemorphLinks
Tools for MRI mouse brain morphometry
☆31Updated 8 years ago
Alternatives and similar repositories for mousemorph
Users that are interested in mousemorph are comparing it to the libraries listed below
Sorting:
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Updated last year
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆76Updated last week
- Multiple Automatically Generated Templates brain segmentation algorithm☆50Updated last year
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆53Updated last year
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆32Updated this week
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆56Updated last month
- Preprocessing of diffusion MRI☆169Updated this week
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆83Updated last week
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆112Updated last year
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆121Updated last week
- List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data☆72Updated 2 years ago
- dMRI based fiber tracking using parallel transport tractography☆28Updated 3 weeks ago
- DICOM to NIfTI conversion, NIfTI tools☆102Updated this week
- Gradient Unwarping in Python☆39Updated 11 months ago
- MP2RAGE Scripts - T1 map correction & Background noise removal☆69Updated 2 years ago
- ☆18Updated 2 years ago
- Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI☆47Updated last week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆159Updated this week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Updated last month
- Structural Neuroimaging Analysis in Python☆33Updated last week
- niimath - a clone of fslmaths. Try the live demo:☆71Updated last month
- Automated Fiber Quantification☆77Updated last year
- Dynamic Contrast Enhanced (DCE) MRI Analysis Software☆52Updated last month
- Processing tools for high-resolution neuroimaging☆73Updated last week
- 3D MRI data exploration and segmentation tool.☆76Updated 2 years ago
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆99Updated 9 months ago
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆35Updated last month
- Multi-site dMRI harmonization☆49Updated 7 months ago
- ☆27Updated 9 months ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆104Updated last month