nmpowell / mousemorphLinks
Tools for MRI mouse brain morphometry
☆31Updated 8 years ago
Alternatives and similar repositories for mousemorph
Users that are interested in mousemorph are comparing it to the libraries listed below
Sorting:
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Updated last year
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆75Updated 3 weeks ago
- Dynamic Contrast Enhanced (DCE) MRI Analysis Software☆52Updated last month
- DICOM to NIfTI conversion, NIfTI tools☆102Updated this week
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆53Updated last year
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆83Updated this week
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆56Updated last month
- ☆18Updated last year
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆112Updated last year
- List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data☆72Updated 2 years ago
- Gradient Unwarping in Python☆39Updated 11 months ago
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆32Updated this week
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆118Updated 2 months ago
- Preprocessing of diffusion MRI☆169Updated this week
- dMRI based fiber tracking using parallel transport tractography☆28Updated 2 weeks ago
- Multiple Automatically Generated Templates brain segmentation algorithm☆50Updated last year
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆49Updated 12 years ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆104Updated last month
- Hongfu Sun's MATLAB codes for QSM reconstruction pipeline.☆77Updated 8 months ago
- Automated Fiber Quantification☆77Updated last year
- Open-source eddy-current and head-motion correction for dMRI.☆19Updated 10 months ago
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆35Updated last month
- Please visit our new location: https://github.com/tractometry/pyAFQ☆60Updated last year
- niimath - a clone of fslmaths. Try the live demo:☆71Updated last month
- MP2RAGE Scripts - T1 map correction & Background noise removal☆69Updated 2 years ago
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆61Updated last year
- Multi-site dMRI harmonization☆49Updated 6 months ago
- 3D MRI data exploration and segmentation tool.☆76Updated 2 years ago
- Microstructure Diffusion Toolbox☆57Updated last year
- MATLAB code for Multidimensional Diffusion MRI☆48Updated 2 months ago