neurospin / pypreprocessLinks
Preprocessing scripts for neuro imaging
☆110Updated last year
Alternatives and similar repositories for pypreprocess
Users that are interested in pypreprocess are comparing it to the libraries listed below
Sorting:
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆101Updated last week
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆97Updated 6 months ago
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆126Updated last year
- Processing tools for high-resolution neuroimaging☆71Updated 9 months ago
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated 2 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆70Updated last year
- BIDS app wrapping recon-all from FreeSurfer☆43Updated last week
- Configurable Pipeline for the Analysis of Connectomes☆68Updated last week
- Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI☆47Updated this week
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆100Updated last year
- Stand alone fMRI software suite for layer-fMRI analyses.☆102Updated last week
- defacing utility for MRI images☆126Updated last year
- The TemplateFlow Archive - A DataLad super-dataset☆88Updated last month
- Preprocessing of diffusion MRI☆163Updated 3 weeks ago
- Curated list of open-access databases with human structural MRI data☆129Updated 6 years ago
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆85Updated last week
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆77Updated 4 years ago
- Modeling and statistical inference on fMRI data in Python☆98Updated 5 years ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆149Updated 3 weeks ago
- For calculating exact geodesic distances on cortical surface meshes☆53Updated last year
- A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.☆198Updated last week
- Scripts and documentation for the PCP's protocol for assessing data quality.☆41Updated 3 years ago
- multi atlas transfer tools for neuroimaging (maTT)☆65Updated 9 months ago
- A Reproducible Workflow for Structural and Functional Connectome Ensemble Learning☆123Updated last year
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆65Updated last week
- Harmonizing neuroimaging data across scanners and sites☆35Updated 5 years ago
- Python interface for generating coordinate tables and region labels from statistical MRI images☆107Updated last month
- Nuisance removal tool for fMRI data☆57Updated last year
- A neuroscience library for Python, intended to complement the existing nibabel library.☆124Updated 2 months ago
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆45Updated 12 years ago