neurospin / pypreprocess
Preprocessing scripts for neuro imaging
☆107Updated last year
Alternatives and similar repositories for pypreprocess:
Users that are interested in pypreprocess are comparing it to the libraries listed below
- Processing tools for high-resolution neuroimaging☆72Updated 3 months ago
- defacing utility for MRI images☆118Updated last year
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆91Updated this week
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆122Updated last year
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆92Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆66Updated last year
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated 9 months ago
- The TemplateFlow Archive - A DataLad super-dataset☆75Updated 11 months ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆76Updated 4 years ago
- Preprocessing of diffusion MRI☆151Updated 3 weeks ago
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 4 months ago
- Linear framework to combine tractography and tissue micro-structure estimation with diffusion MRI☆45Updated this week
- ☆90Updated 7 years ago
- Nuisance removal tool for fMRI data☆56Updated last year
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆139Updated 2 weeks ago
- multi atlas transfer tools for neuroimaging (maTT)☆64Updated 4 months ago
- PALM: Permutation Analysis of Linear Models☆73Updated this week
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆93Updated 10 months ago
- Neuroimaging widgets for jupyter notebooks☆86Updated 2 years ago
- Curated list of open-access databases with human structural MRI data☆127Updated 5 years ago
- Modeling and statistical inference on fMRI data in Python☆97Updated 4 years ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆91Updated 2 weeks ago
- Gradient Unwarping in Python☆35Updated 2 months ago
- Multiple Automatically Generated Templates brain segmentation algorithm☆48Updated 9 months ago
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆120Updated 2 years ago
- A neuroscience library for Python, intended to complement the existing nibabel library.☆121Updated last month
- Scripts and documentation for the PCP's protocol for assessing data quality.☆40Updated 3 years ago
- For calculating exact geodesic distances on cortical surface meshes☆53Updated 7 months ago
- Configurable Pipeline for the Analysis of Connectomes☆67Updated this week
- Python interface for generating coordinate tables and region labels from statistical MRI images☆92Updated 2 weeks ago