Alternatives and similar repositories for pypreprocess

Users that are interested in pypreprocess are comparing it to the libraries listed below

• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆92Updated 4 months ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 8 months ago
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆99Updated this week
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆69Updated last year
• miykael / nipype_tutorial
  Learn Nipype with these tutorial notebooks - go here to see them online -->
  ☆125Updated last year
• NeuroanatomyAndConnectivity / surfdist
  For calculating exact geodesic distances on cortical surface meshes
  ☆53Updated 11 months ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 9 months ago
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆160Updated this week
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆98Updated last year
• daducci / COMMIT
  Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI
  ☆46Updated this week
• FCP-INDI / C-PAC
  Configurable Pipeline for the Analysis of Connectomes
  ☆68Updated this week
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated last month
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆100Updated last month
• poldracklab / pydeface
  defacing utility for MRI images
  ☆125Updated last year
• cMadan / openMorph
  Curated list of open-access databases with human structural MRI data
  ☆129Updated 6 years ago
• preprocessed-connectomes-project / quality-assessment-protocol
  Scripts and documentation for the PCP's protocol for assessing data quality.
  ☆41Updated 3 years ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆144Updated this week
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆86Updated 2 months ago
• Washington-University / gradunwarp
  Gradient Unwarping in Python
  ☆37Updated 7 months ago
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆82Updated last week
• nipy / heudiconv
  Flexible DICOM conversion into structured directory layouts
  ☆263Updated last week
• zuoxinian / CCS
  Connectome Computation System
  ☆80Updated 10 months ago
• dPys / PyNets
  A Reproducible Workflow for Structural and Functional Connectome Ensemble Learning
  ☆122Updated last year
• nipreps / mriqc
  Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
  ☆333Updated 2 months ago
• andersonwinkler / PALM
  PALM: Permutation Analysis of Linear Models
  ☆75Updated 2 months ago
• jmtyszka / bidskit
  Utility functions for working with DICOM and BIDS neuroimaging data
  ☆62Updated 2 months ago
• daducci / AMICO
  Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
  ☆112Updated 6 months ago
• nilearn / nistats
  Modeling and statistical inference on fMRI data in Python
  ☆97Updated 5 years ago
• HumanBrainED / NHP-BrainExtraction
  ☆39Updated 3 years ago