neurospin / pypreprocessLinks
Preprocessing scripts for neuro imaging
☆109Updated last year
Alternatives and similar repositories for pypreprocess
Users that are interested in pypreprocess are comparing it to the libraries listed below
Sorting:
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆99Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆67Updated last year
- Processing tools for high-resolution neuroimaging☆71Updated 7 months ago
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆123Updated last year
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated 3 weeks ago
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆92Updated 4 months ago
- Configurable Pipeline for the Analysis of Connectomes☆68Updated last week
- defacing utility for MRI images☆122Updated last year
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 8 months ago
- Preprocessing of diffusion MRI☆158Updated 2 months ago
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆97Updated last year
- Linear framework to combine tractography and tissue micro-structure estimation with diffusion MRI☆46Updated last month
- Stand alone fMRI software suite for layer-fMRI analyses.☆96Updated 2 weeks ago
- PALM: Permutation Analysis of Linear Models☆75Updated last month
- The TemplateFlow Archive - A DataLad super-dataset☆84Updated last month
- Curated list of open-access databases with human structural MRI data☆129Updated 6 years ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Updated 4 years ago
- Scripts and documentation for the PCP's protocol for assessing data quality.☆41Updated 3 years ago
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆81Updated last week
- Gradient Unwarping in Python☆37Updated 6 months ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆143Updated last month
- Modeling and statistical inference on fMRI data in Python☆97Updated 5 years ago
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆331Updated last month
- Flexible DICOM conversion into structured directory layouts☆259Updated last week
- A Reproducible Workflow for Structural and Functional Connectome Ensemble Learning☆122Updated last year
- A framework for developing neural network models for 3D image processing.☆165Updated 3 weeks ago
- Harmonizing neuroimaging data across scanners and sites☆34Updated 4 years ago
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆109Updated 5 months ago
- multi atlas transfer tools for neuroimaging (maTT)☆64Updated 7 months ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated last week