BioDSA: Framework for Vibe Prototyping of AI Agents for Biomedicine
☆86Aug 4, 2026Updated 3 weeks ago
Alternatives and similar repositories for BioDSA
Users that are interested in BioDSA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A library for converting EHR data into LLM ingestible text.☆22Aug 18, 2026Updated last week
- ☆31Feb 6, 2026Updated 6 months ago
- Pytorch implementation of Med2Vec.☆10Apr 26, 2024Updated 2 years ago
- ☆47May 17, 2025Updated last year
- AIONER☆70Jul 25, 2024Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- 💊 Cutting-edge automation of computational drug discovery pipelines☆37Jun 14, 2026Updated 2 months ago
- openteam-studio public version☆30Mar 27, 2026Updated 4 months ago
- Data and code required to reach the main conclusions of the fastsmcg paper☆11Sep 19, 2023Updated 2 years ago
- ICLR'24 | BioBridge: Bridging Biomedical Foundation Models via Knowledge Graphs☆80May 10, 2024Updated 2 years ago
- Medea: An AI agent for therapeutic reasoning across biological contexts☆126Jul 17, 2026Updated last month
- ☆21Jan 28, 2026Updated 6 months ago
- ☆13May 24, 2026Updated 3 months ago
- The official implementation of "Enhancing Representation in Radiography-Reports Foundation Model: A Granular Alignment Algorithm Using Ma…☆12Sep 13, 2024Updated last year
- Agentic System, Tool Use, Electronic Health Record, Large Language Models, Clinical Nature Language Processing☆24Apr 13, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python package for InfoAlign☆13Oct 14, 2024Updated last year
- R tool to analyse and integrate multiple -omics data☆16Jan 4, 2026Updated 7 months ago
- ML-based ligand generator☆23May 8, 2026Updated 3 months ago
- ☆25Nov 27, 2025Updated 8 months ago
- Representation learning for protein functional site analysis☆17Aug 11, 2023Updated 3 years ago
- ☆16Dec 18, 2024Updated last year
- Visualizing the space of chemical reactions with the parametric (learnable) t-SNE.☆16May 5, 2022Updated 4 years ago
- Reinforcement learning based cyclic peptide binder design☆19Jul 22, 2025Updated last year
- Automatic extraction of interacting compound-target pairs from ChEMBL.☆22Sep 23, 2025Updated 11 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The Clinical Trials Knowledge Graph☆69Mar 9, 2023Updated 3 years ago
- Biomni: a general-purpose biomedical AI agent☆3,777Updated this week
- R code to work with the NIH RePORTER API☆11Feb 11, 2026Updated 6 months ago
- Interfacing R's Spectra package with the Python world.☆13May 12, 2026Updated 3 months ago
- Python package wrapping the DOCK Fortran program and providing several tools built on top of it.☆17Jan 16, 2026Updated 7 months ago
- ☆17Jun 22, 2025Updated last year
- [ML4H'25] MedVLThinker: Simple Baselines for Multimodal Medical Reasoning☆60Dec 21, 2025Updated 8 months ago
- BulkFormer: A large-scale foundation model for human bulk transcriptomes☆79Jul 3, 2026Updated last month
- Agentic design of virtual cell models☆161Aug 1, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- development repository for PyInteraph2☆23Jun 18, 2026Updated 2 months ago
- AMID: Towards Autonomous and Auditable Medical Imaging Model Development☆22Jul 14, 2026Updated last month
- A modern multimodal knowledge graph with type-specific metadata across biomedical domains.☆120Aug 16, 2026Updated last week
- ☆30Sep 8, 2024Updated last year
- ☆15Mar 4, 2024Updated 2 years ago
- A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…☆19Aug 9, 2025Updated last year
- Qworld: Question-Specific Evaluation Criteria for LLMs☆34Aug 17, 2026Updated last week