LLM-based gene function enrichment tool
☆18Feb 19, 2025Updated last year
Alternatives and similar repositories for talisman
Users that are interested in talisman are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools for working with KGCL☆20Nov 19, 2024Updated last year
- R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.☆18Feb 24, 2026Updated 6 months ago
- A motley crew of agents developed by the Monarch Initiative☆26Nov 17, 2025Updated 9 months ago
- Bayesian OWL ontology merging☆37Jun 4, 2025Updated last year
- Simple rust implementation of semantic similarity☆16Feb 20, 2026Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆15Updated this week
- Monarch agent tutorial☆15Apr 15, 2025Updated last year
- Common value sets (enums) for science, biomedicine, computing, and other areas☆15Aug 18, 2026Updated 2 weeks ago
- Disease Mechanisms KB☆58Updated this week
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)☆18Jan 7, 2022Updated 4 years ago
- Demonstration of AI review of existing functional annotations☆24Updated this week
- ☆16Aug 1, 2026Updated last month
- A simple Python wrapper for multiple deep research tools including OpenAI Deep Research, FutureHouse Falcon, and Perplexity AI.☆18Aug 28, 2026Updated last week
- Customizable translation of OBO graphs to dot for visualization using graphviz and other tools☆27Feb 21, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A knowledge extraction tool that uses a large language model to extract semantic information from text☆30Jan 3, 2023Updated 3 years ago
- Summary Dashboard for Open Biological and Biomedical Ontologies☆24Jun 8, 2026Updated 2 months ago
- A framework for empirical evaluation of phenotype matching and prioritisation☆20Updated this week
- Network Embedding All the Things☆19Oct 4, 2022Updated 3 years ago
- ☆26Updated this week
- Data transformation framework for LinkML data models☆70Aug 17, 2026Updated 3 weeks ago
- A python library for calculating semantic similarity between patients in N3C☆14Oct 5, 2022Updated 3 years ago
- Semantic prefix map registry☆14Jul 2, 2026Updated 2 months ago
- Python toolkit for SSSOM mapping format☆64Aug 31, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆28Sep 17, 2025Updated 11 months ago
- An ontology of core ecological entities☆17Aug 31, 2026Updated last week
- An ontology about groups of interacting organisms such as populations and communities☆18Oct 27, 2022Updated 3 years ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆34Mar 19, 2024Updated 2 years ago
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated last year
- Translates LinkML schemas into Datalog programs and executes them using Souffle, enabling advanced validation and inference over instance…☆21Feb 14, 2024Updated 2 years ago
- Metadata schema for the German Human Genome-Phenome Archive (GHGA)☆16Aug 21, 2026Updated 2 weeks ago
- A little OWL in SPARQL.☆16Aug 13, 2024Updated 2 years ago
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.☆14Aug 31, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Datamodel for KGCL (Knowledge Graph Change Language)☆23Feb 11, 2026Updated 6 months ago
- Bridge2AI Standards Registry data models, API specification, and other documentation.☆16Updated this week
- ☆16Aug 27, 2026Updated last week
- LLM-driven curation assist tool☆118Oct 20, 2025Updated 10 months ago
- Repository for representing genotypes and their association with phenotypes☆20Feb 2, 2026Updated 7 months ago
- Registry of schemas that use LinkML☆19Jul 27, 2026Updated last month
- MCP server for OWL applications☆19Jun 5, 2025Updated last year