fastobo / fastobo-py
Faultless AST for Open Biomedical Ontologies in Python.
โ28Updated this week
Alternatives and similar repositories for fastobo-py:
Users that are interested in fastobo-py are comparing it to the libraries listed below
- Draft cell type definitions from data - candidates for inclusion in CLโ12Updated last month
- PyBioPAX: A python implementation of the BioPAX object modelโ24Updated 9 months ago
- ๐ Embiggen is the Python Graph Representation learning, Prediction and Evaluation submodule of the GRAPE library.โ42Updated last year
- A stitching platform for InXightโ16Updated 3 months ago
- Managing metadata and policy around metadata in NMDCโ2Updated 9 months ago
- National Microbiome Data Collaborative (NMDC) unified data modelโ29Updated this week
- Fission Yeast Phenotype Ontologyโ16Updated this week
- โ12Updated this week
- Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to cโฆโ50Updated 6 months ago
- ๐บ๏ธ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primaโฆโ51Updated this week
- โ14Updated last month
- โ24Updated 4 years ago
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)โ40Updated this week
- The Gene Ontology Helpdeskโ16Updated last week
- ๐ฎ An integrative registry of biological databases, ontologies, and nomenclatures.โ120Updated this week
- Ontology cross-reference and mapping serviceโ18Updated 7 months ago
- Python Phenopacket Toolsโ15Updated 3 weeks ago
- Summary Dashboard for Open Biological and Biomedical Ontologiesโ21Updated 2 months ago
- LLM-based gene function enrichment toolโ10Updated 8 months ago
- Explore the Plant Trait Ontology on the Planteome site.โ41Updated 3 weeks ago
- An ontology containing biotic and abiotic plant stresses. Part of the Planteome suite of reference ontologies. Formerly called the Ontoโฆโ15Updated 4 months ago
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.โ21Updated last month
- Schema for chemistry ontology classesโ16Updated 7 months ago
- Data Ingestion Pipeline for Monarchโ57Updated 2 years ago
- Build for NCBITaxonโ27Updated 2 months ago
- Integrated OBO ontology storeโ44Updated 3 months ago
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.โ13Updated last month
- phenol: Phenotype ontology libraryโ23Updated 7 months ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhubโ32Updated 10 months ago