fastobo / fastobo-py
Faultless AST for Open Biomedical Ontologies in Python.
β28Updated this week
Alternatives and similar repositories for fastobo-py:
Users that are interested in fastobo-py are comparing it to the libraries listed below
- Draft cell type definitions from data - candidates for inclusion in CLβ12Updated 2 months ago
- PyBioPAX: A python implementation of the BioPAX object modelβ24Updated 10 months ago
- π Embiggen is the Python Graph Representation learning, Prediction and Evaluation submodule of the GRAPE library.β42Updated last year
- A stitching platform for InXightβ16Updated 4 months ago
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)β40Updated 3 weeks ago
- πΊοΈ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primaβ¦β51Updated last month
- LLM-based gene function enrichment toolβ10Updated 3 weeks ago
- β24Updated 4 years ago
- An app and library for building, conversion, and validation of GA4GH Phenopackets.β13Updated last year
- β14Updated last month
- Fission Yeast Phenotype Ontologyβ16Updated last week
- The Gene Ontology Helpdeskβ16Updated last month
- National Microbiome Data Collaborative (NMDC) unified data modelβ30Updated this week
- Summary Dashboard for Open Biological and Biomedical Ontologiesβ21Updated 3 months ago
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.β13Updated 2 months ago
- Managing metadata and policy around metadata in NMDCβ2Updated 10 months ago
- Ontology cross-reference and mapping serviceβ18Updated 8 months ago
- Data Ingestion Pipeline for Monarchβ57Updated 2 years ago
- β12Updated last month
- Python Phenopacket Toolsβ15Updated last month
- Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to cβ¦β50Updated 7 months ago
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.β21Updated last week
- phenol: Phenotype ontology libraryβ23Updated 8 months ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhubβ32Updated 11 months ago
- Communitiy-based Cell Line Ontologyβ18Updated 8 months ago
- Build for NCBITaxonβ27Updated 2 weeks ago
- β17Updated this week
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across speciesβ13Updated 3 weeks ago
- A collection of metadata, tools, and files associated with the Gene Ontology public web presence.β46Updated last week