srnas / spqr
Simulation code for the prediction of RNA structures.
☆10Updated 2 months ago
Alternatives and similar repositories for spqr:
Users that are interested in spqr are comparing it to the libraries listed below
- Self explained tutorial for molecular dynamics simulation using gromacs☆21Updated 4 months ago
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆10Updated 4 years ago
- Printing text using protein structures☆13Updated 3 years ago
- Generate Ramachandran plots for single PDB structure and as heatmap for MD trajectory☆9Updated 2 years ago
- Galaxy Tools for Computational Chemistry☆15Updated 3 months ago
- Educational Notes on Molecular Modeling☆11Updated 4 years ago
- A collection of molecular modelling tools for UCSF Chimera☆17Updated 5 years ago
- ☆15Updated 2 years ago
- A mirror of official bio3d development site at Bitbucket: https://bitbucket.org/Grantlab/bio3d. See also bio3d website: http://thegrantl…☆21Updated last year
- Python implementation of the FR3D software for searching and annotating RNA 3D structures☆18Updated 2 weeks ago
- Analyse Nucleic Acids Structure and Simulations with baRNAba☆41Updated last year
- ☆15Updated 6 years ago
- ☆28Updated 10 months ago
- A parallel molecular docking program based on AutoDock Vina☆19Updated 6 years ago
- Robust RNA structure refinement by a nucleobase-centric sampling algorithm coupled with a backbone rotameric and quantum-mechanical-energ…☆15Updated 3 years ago
- RetroPath2.0 to pathways☆16Updated last year
- PyDock Tutorial☆30Updated 6 years ago
- Tutorials and examples for nicer animations (movies) and images in PyMOL.☆21Updated 10 years ago
- scripts and facilities for in-silico mutagenesis with FoldX☆56Updated 3 months ago
- Personal Notes☆23Updated 2 weeks ago
- ☆34Updated 5 months ago
- A unified and modular interface to homology modelling software☆10Updated last year
- The aim of this repository is to provide simple tools to help those working with ColabFold BATCH both for pre and post-processing steps.☆16Updated last year
- Evolutionary conservation estimation of residues or nucleotides☆37Updated 2 years ago
- A Python platform for Structural Bioinformatics☆56Updated this week
- Framework for the rapid modeling glycans and glycoproteins.☆29Updated last year
- ATTRACT program suite for macromolecular docking (protein-protein, protein-nucleic acid, protein-peptide)☆16Updated last year
- ☆13Updated 6 years ago
- Contact Prediction ToolKit☆22Updated 2 years ago
- Dock Multiple Ligands with AutoDock Vina with one Command☆11Updated 7 years ago