Alternatives and similar repositories for msu_ngs2015

Users that are interested in msu_ngs2015 are comparing it to the libraries listed below

• BCCHR-trainee-omics-group / StudyGroup
  This is where TOG houses all of its workshop scripts, as well as details on its upcoming workshops and seminars.
  ☆44Updated last year
• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆121Updated 5 years ago
• stephenturner / annotables
  R data package for annotating/converting Gene IDs
  ☆166Updated 4 months ago
• hbctraining / Accessing_public_genomic_data
  Tutorials on accessing public reference and genomic data
  ☆30Updated 9 months ago
• hbctraining / main
  ☆56Updated 2 weeks ago
• obigriffith / biostar-tutorials
  Code for biostar tutorials - mostly R and Perl
  ☆50Updated last year
• kasperdanielhansen / genbioconductor
  Materials for Genomics Data Science: Introduction to Bioconductor
  ☆97Updated last year
• Bioconductor / CSAMA
  Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology
  ☆94Updated last year
• csoneson / ARMOR
  Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data
  ☆165Updated last month
• hbctraining / DGE_workshop_salmon
  ☆73Updated 3 years ago
• tallulandrews / scRNASeqPipeline
  ☆118Updated 7 years ago
• jdblischak / singleCellSeq
  Batch effects and the effective design of single-cell gene expression studies
  ☆104Updated 6 years ago
• broadinstitute / DLBCL_Nat_Med_April_2018
  ☆14Updated 5 years ago
• Bioconductor / Contributions
  Contribute Packages to Bioconductor
  ☆143Updated 7 months ago
• jokergoo / EnrichedHeatmap
  make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
  ☆198Updated last year
• iDEP-SDSU / idep
  Integrated Differential Expression and Pathway analysis
  ☆134Updated last week
• simonvh / bioinfosummer
  Tutorial for AMSI BioInfoSummer 2018
  ☆30Updated 6 years ago
• hms-dbmi / scde
  R package for analyzing single-cell RNA-seq data
  ☆177Updated last year
• thelovelab / rnaseqGene
  RNA-seq workflow: exploratory analysis and differential expression
  ☆80Updated 2 years ago
• GSEA-MSigDB / GSEA_R
  Updated implementation of the GSEA-P R application for modern R distributions
  ☆97Updated 3 years ago
• chrisamiller / fishplot
  Create timecourse "fish plots" that show changes in the clonal architecture of tumors
  ☆171Updated 2 years ago
• drisso / bioc2016singlecell
  Bioconductor workshop: Analysis of single-cell RNA-seq data with R and Bioconductor
  ☆80Updated 9 years ago
• hawn-lab / workshops_UW_Seattle
  ☆26Updated 4 years ago
• bvieth / powsimR
  Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…
  ☆107Updated 2 years ago
• snakemake-workflows / single-cell-rna-seq
  A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.
  ☆103Updated 2 years ago
• NBISweden / workshop-ngsintro
  Workshop • Intro to Bioinformatics using NGS data • 5 days
  ☆16Updated this week
• YeoLab / single-cell-bioinformatics
  Course material in notebook format for learning about single cell bioinformatics methods
  ☆99Updated 9 years ago
• ucdavis-bioinformatics-training / 2017_2018-single-cell-RNA-sequencing-Workshop-UCD_UCB_UCSF
  2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF
  ☆36Updated 7 years ago
• hbctraining / Intro-to-R-with-DGE
  ☆61Updated 4 years ago
• ShixiangWang / sigminer
  🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…
  ☆157Updated 2 months ago