msk-mind / lunaLinks
Scripts for data processing
☆48Updated last year
Alternatives and similar repositories for luna
Users that are interested in luna are comparing it to the libraries listed below
Sorting:
- A pan-cancer platform for mutation prediction from routine histology☆69Updated 4 years ago
- Train a model to predict gene expression from histology slides.☆108Updated 3 years ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆77Updated 4 years ago
- ☆34Updated 2 years ago
- ☆49Updated 3 years ago
- ☆20Updated 2 years ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆72Updated 8 months ago
- Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…☆51Updated last year
- A Python library for deep learning on whole-slide images☆54Updated 3 years ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆44Updated 10 months ago
- ☆31Updated 4 years ago
- First commit☆63Updated 3 years ago
- HCC_Deep_learning☆19Updated 5 years ago
- Data and code to accompany our Nature publication☆46Updated 3 years ago
- Gene mutation and pathway activity prediction from H&E slides☆35Updated 3 years ago
- Tools to build deep learning pipelines.☆109Updated 11 months ago
- machine-readable information for the TCGA dataset, mirrored from other sources☆21Updated 3 years ago
- GrandQC tool for tissue detection and quality control in pathology☆70Updated 7 months ago
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆42Updated 5 months ago
- Code from Foersch et al. (Under Construction / Development)☆37Updated 2 years ago
- Deep learning on histopathology images.☆132Updated 4 years ago
- ☆15Updated last year
- deep learning pipeline repository for the paper "Geospatial immune variability illuminates differential evolution of lung adenocarcinoma…☆52Updated 5 years ago
- ☆20Updated 2 years ago
- [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…☆24Updated 2 years ago
- A set of codes to classify H&E slides using deep learning☆29Updated 3 years ago
- Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning☆45Updated 4 years ago
- Pipeline for computational pathology☆38Updated last year
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆67Updated last year
- CEll spatial Organization-based graph convolutional network☆26Updated last year