kyegomez / AlphaFold3

Related projects ⓘ

Alternatives and complementary repositories for AlphaFold3

• lucidrains / alphafold3-pytorch
  Implementation of Alphafold 3 in Pytorch
  ☆1,240Updated this week
• bytedance / Protenix
  A trainable PyTorch reproduction of AlphaFold 3.
  ☆653Updated this week
• baker-laboratory / RoseTTAFold-All-Atom
  ☆649Updated 3 months ago
• dauparas / ProteinMPNN
  Code for the ProteinMPNN paper
  ☆1,034Updated 3 months ago
• Ligo-Biosciences / AlphaFold3
  Open source implementation of AlphaFold3
  ☆930Updated last month
• generatebio / chroma
  A generative model for programmable protein design
  ☆694Updated 7 months ago
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆623Updated 3 weeks ago
• chaidiscovery / chai-lab
  Chai-1, SOTA model for biomolecular structure prediction
  ☆1,257Updated this week
• evolutionaryscale / esm
  ☆1,293Updated 3 weeks ago
• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆609Updated 2 weeks ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆333Updated 5 months ago
• Peldom / papers_for_protein_design_using_DL
  List of papers about Proteins Design using Deep Learning
  ☆1,460Updated last week
• microsoft / evodiff
  Generation of protein sequences and evolutionary alignments via discrete diffusion models
  ☆524Updated last month
• google-deepmind / alphamissense
  ☆519Updated 8 months ago
• gcorso / DiffDock
  Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
  ☆1,097Updated 2 months ago
• bjing2016 / alphaflow
  AlphaFold Meets Flow Matching for Generating Protein Ensembles
  ☆371Updated last month
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆319Updated 4 months ago
• evo-design / evo
  Biological foundation modeling from molecular to genome scale
  ☆1,093Updated this week
• westlake-repl / SaProt
  Saprot: Protein Language Model with Structural Alphabet (AA+3Di)
  ☆354Updated this week
• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆296Updated last week
• jwohlwend / boltz
  Official repository for the Boltz-1 biomolecular interaction model
  ☆1,036Updated this week
• steineggerlab / foldseek
  Foldseek enables fast and sensitive comparisons of large structure sets.
  ☆831Updated last week
• microsoft / foldingdiff
  Diffusion models of protein structure; trigonometry and attention are all you need!
  ☆520Updated 11 months ago
• nrbennet / dl_binder_design
  ☆248Updated 3 months ago
• RosettaCommons / RFdiffusion
  Code for running RFdiffusion
  ☆1,777Updated 2 months ago
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆265Updated 3 weeks ago
• dptech-corp / Uni-Fold
  An open-source platform for developing protein models beyond AlphaFold.
  ☆378Updated 4 months ago
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆267Updated 7 months ago
• universvm / how_to_create_a_protein
  A short course on proteins and protein design aimed at early career students
  ☆142Updated 4 months ago
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆328Updated last year