Official and maintained implementation of the paper "Attention-Based Transformers for Instance Segmentation of Cells in Microstructures" [BIBM 2020].
☆108Mar 28, 2022Updated 4 years ago
Alternatives and similar repositories for Cell-DETR
Users that are interested in Cell-DETR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ToeffiPy is a PyTorch like autograd/deep learning library based only on NumPy.☆16Mar 28, 2022Updated 4 years ago
- Official and maintained implementation of the dataset paper "An Instance Segmentation Dataset of Yeast Cells in Microstructures" [EMBC 20…☆14Feb 21, 2024Updated 2 years ago
- Official and maintained implementation of the paper "Multi-StyleGAN: Towards Image-Based Simulation of Time-Lapse Live-Cell Microscopy" […☆11Mar 28, 2022Updated 4 years ago
- PyTorch reimplementation of the paper: "Semantic Pyramid for Image Generation" [CVPR 2020].☆47Mar 28, 2022Updated 4 years ago
- [MICCAI 2019] Multi-scale Cell Instance Segmentation with Keypoint Graph based Bounding Boxes☆83Dec 4, 2019Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Histopathology Feature Extractors (2024)☆15Jun 14, 2024Updated 2 years ago
- Official implementation of the CVPR 2022 paper "DETReg: Unsupervised Pretraining with Region Priors for Object Detection".☆339Jul 18, 2023Updated 3 years ago
- ☆11Jul 18, 2022Updated 4 years ago
- Weakly Supervised Cell Instance Segmentation by Propagating from Detection Response, in MICCAI2019.☆42Dec 9, 2020Updated 5 years ago
- ☆38Oct 26, 2021Updated 4 years ago
- ☆11Jan 17, 2025Updated last year
- ☆23Mar 13, 2026Updated 6 months ago
- ☆21Dec 8, 2022Updated 3 years ago
- The repository contains a simple pipeline for training Nuclei Segmentation Datasets of Histopathology Images.☆36Dec 8, 2022Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Solution for the Sartorius - Cell Instance Segmentation competition☆22Feb 14, 2022Updated 4 years ago
- machine-readable information for the TCGA dataset, mirrored from other sources☆23Jun 14, 2022Updated 4 years ago
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆21Mar 25, 2022Updated 4 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Jan 5, 2026Updated 8 months ago
- ☆319Oct 26, 2022Updated 3 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆57Apr 4, 2022Updated 4 years ago
- ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…☆68Nov 3, 2022Updated 3 years ago
- SMCA replication☆21Jul 24, 2021Updated 5 years ago
- PyTorch reimplementation of the paper "Swin Transformer V2: Scaling Up Capacity and Resolution" (CVPR 2022)☆210Sep 11, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- This is the implementation of Embedded Prompt Tuning(EPT).☆14Feb 10, 2025Updated last year
- ☆41Sep 21, 2023Updated 3 years ago
- Evaluation code for the PanNuke dataset☆31Oct 20, 2020Updated 5 years ago
- An image analysis tool for measuring microorganism colony growth☆12Dec 12, 2025Updated 9 months ago
- [JBHI2022] A novel 3D unsupervised domain adaptation framework for cross-modality medical image segmentation☆49Oct 5, 2023Updated 2 years ago
- An implementation of Knowledge distillation for segmentation, to train a small (student) UNet from a larger (teacher) UNet thereby reduci…☆54May 7, 2020Updated 6 years ago
- Codebase for "A Foundation Model for Cell Segmentation"☆220Jun 4, 2026Updated 3 months ago
- Use this to download all elements of the BCSS dataset described in: Amgad M, Elfandy H, ..., Gutman DA, Cooper LAD. Structured crowdsourc…☆185Apr 1, 2022Updated 4 years ago
- The code of Triple U-net: Hematoxylin-aware Nuclei Segmentation with Progressive Dense Feature Aggregation.☆20Mar 17, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Predicting Axillary Lymph Node Metastasis in Early Breast Cancer Using Deep Learning on Primary Tumor Biopsy Slides, BCNB Dataset☆68Nov 10, 2025Updated 10 months ago
- Implementation of Semi-Supervised and Semi-Weakly Supervised Teacher/Student Learning approaches☆13Jan 18, 2023Updated 3 years ago
- imagebox viewer of svs whole slide images☆13Sep 3, 2024Updated 2 years ago
- ☆30Mar 15, 2023Updated 3 years ago
- ☆76Sep 23, 2024Updated 2 years ago
- Official code for the paper "A Good Feature Extractor Is All You Need for Weakly Supervised Pathology Slide Classification"☆18Aug 17, 2024Updated 2 years ago
- Medical Image Segmentation using Squeeze-and-Expansion Transformers☆229Jun 15, 2022Updated 4 years ago