PhilBoileau / scPCALinks
A toolbox for sparse contrastive principal component analysis
☆12Updated 11 months ago
Alternatives and similar repositories for scPCA
Users that are interested in scPCA are comparing it to the libraries listed below
Sorting:
- tests for statistical significance of clustering☆38Updated 7 years ago
- Dimension Reduction and Estimation Methods☆55Updated 4 months ago
- R package for Empirical Bayes Factor Analysis.☆52Updated last year
- ☆13Updated 4 years ago
- Nonnegative Linear Models (NNLM) and Nonnegative Matrix Factorization (NMF or NNMF).☆82Updated last year
- Fits a Principal Curve in Arbitrary Dimension ⤵☆44Updated last year
- Diverse Cluster Ensemble in R☆39Updated 7 months ago
- ☆17Updated 2 years ago
- R package for computation of (adjusted) rand-index and other such scores☆27Updated 2 months ago
- Package to wrangle and visualize genomic data in R☆26Updated 3 months ago
- Survival Support Vector Analysis☆19Updated 9 months ago
- Out-of-Core Principal Component Analysis☆19Updated 8 years ago
- Fast algorithms for fitting topic models and non-negative matrix factorizations to count data.☆85Updated last month
- Clone of the Bioconductor repository for the TileDBArray package.☆11Updated 7 months ago
- Monte Carlo Reference-based Consensus Clustering☆37Updated 5 years ago
- Network diffusion algorithms in R.☆21Updated 2 years ago
- R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics☆12Updated 2 years ago
- Implementation of the matrixStats API for sparse matrices☆54Updated 9 months ago
- Space- and time-optimal algorithms for large single-cell expression matrices, with a focus on single-cell CRISPR screens.☆11Updated last year
- BioC2020: Where Software and Biology Connect☆12Updated 2 years ago
- Structure learning based for zero-inflated negative binomial data☆10Updated last year
- A Grammar of Data Manipulation for Omics Data☆21Updated 5 years ago
- Infrastructure for Ordering using Seriation - R Package☆84Updated 3 months ago
- A unified framework for working transparently with on-disk and in-memory array-like datasets☆27Updated 3 months ago
- Various Ideas for Confounder Adjustment in Regression☆24Updated 2 years ago
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆24Updated 2 years ago
- ☆14Updated last year
- Issues and pull requests for BiocStyle should go here.☆14Updated 3 months ago
- LEGACY: Git commands to keep a Git repository and Bioconductor SVN in sync☆10Updated 9 years ago
- ☆15Updated 6 years ago