tomasvicar / Cell-segmentation-methods-comparison
Matlab implementation of several methods for cell detection and cell segmentation
☆16Updated 4 years ago
Alternatives and similar repositories for Cell-segmentation-methods-comparison:
Users that are interested in Cell-segmentation-methods-comparison are comparing it to the libraries listed below
- NuSeT: A Deep Learning Tool for Reliably Separating and Analyzing Crowded Cells☆20Updated 4 years ago
- ☆14Updated 5 years ago
- WSICS☆30Updated 5 years ago
- ☆30Updated 3 years ago
- This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in H…☆50Updated 5 years ago
- Joint training of denoising and segmentation.☆70Updated last year
- Fast, Texture Feature Maps from N-Dimensional Images☆22Updated 2 weeks ago
- Code repository for the UDCT project☆21Updated 5 years ago
- PyTorch implementation of several neural network models for cellular image segmentation☆47Updated 5 years ago
- Codes for Fast GPU-Enabled Color Normalization of Whole Slide Images in Digital Pathology☆75Updated 4 years ago
- Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development☆31Updated last year
- InstantDL: An easy and convenient deep learning pipeline for image segmentation and classification☆42Updated last year
- Whole Slide Digital Pathology Image Tissue Localization☆44Updated last year
- Re-stained whole slide image alignment☆32Updated last year
- This is the MATLAB code for stain separation and color normalization in computational pathology (histopathological images)☆69Updated 8 years ago
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆83Updated last week
- [Medical Image Analysis 2019] Attentive Neural Cell Instance Segmentation☆47Updated 3 years ago
- Notebooks for VoidSeg☆16Updated 5 years ago
- Python scripts to read and write the CREMI hdf5 file format.☆38Updated last year
- ☆20Updated 3 years ago
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆66Updated 3 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆67Updated last month
- Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images☆13Updated 6 years ago
- Interactive Segmentation of Nucleus☆61Updated 2 years ago
- A proof of concept to run python segmentations and recovering the results within QuPath☆19Updated 4 years ago
- This repository contains an implementation of a deep learning Mask R-CNN algorithm for nuclei segmentation from whole slide images of tis…☆17Updated 5 years ago
- [TMI 2019] Attention to Lesion: Lesion-Aware Convolutional Neural Network for Retinal Optical Coherence Tomography Image Classification☆48Updated last year
- simple package for augmentation of n-dimensional arrays☆32Updated last year
- Deep Convolutional Gaussian Mixture Model for Stain-Color Normalization in Histopathological H&E Images☆79Updated 3 years ago
- Framework for registration of sequential digitized histology slices☆28Updated 2 years ago