histocartography / hact-netView external linksLinks
☆71Jun 15, 2021Updated 4 years ago
Alternatives and similar repositories for hact-net
Users that are interested in hact-net are comparing it to the libraries listed below
Sorting:
- Code for replicating results presented in the paper: "Quantifying Explainers of Graph Neural Networks in Computational Pathology"☆45May 19, 2021Updated 4 years ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆265Dec 23, 2023Updated 2 years ago
- ☆20Sep 19, 2022Updated 3 years ago
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆161May 14, 2024Updated last year
- ☆68Sep 23, 2024Updated last year
- ☆57Jan 18, 2022Updated 4 years ago
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆16Jun 15, 2023Updated 2 years ago
- ☆38Feb 16, 2023Updated 2 years ago
- [CVPR'23] Histopathology Whole Slide Image Analysis with Heterogeneous Graph Representation Learning☆95Aug 25, 2023Updated 2 years ago
- Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering☆111Jun 9, 2023Updated 2 years ago
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆21Mar 25, 2022Updated 3 years ago
- ☆20Dec 20, 2022Updated 3 years ago
- ☆56Apr 14, 2025Updated 10 months ago
- Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.☆682Oct 27, 2023Updated 2 years ago
- ☆13Aug 30, 2024Updated last year
- Data and code to accompany our Nature publication☆48May 3, 2022Updated 3 years ago
- Fusing Histology and Genomics via Deep Learning - IEEE TMI☆331Aug 22, 2022Updated 3 years ago
- A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data☆18Jun 22, 2020Updated 5 years ago
- ☆24Aug 25, 2022Updated 3 years ago
- First commit☆65Jul 5, 2022Updated 3 years ago
- Hierarchical Image Pyramid Transformer - CVPR 2022 (Oral)☆612Mar 19, 2024Updated last year
- ☆29Jun 4, 2023Updated 2 years ago
- ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…☆68Nov 3, 2022Updated 3 years ago
- Cell Graph Transformer for Nuclei Classification, AAAI 2024☆27Oct 8, 2024Updated last year
- The source code of 'Diagnose Like A Pathologist: Weakly-Supervised Pathologist-Tree Network for Slide-Level Immunohistochemical Scoring' …☆24Mar 16, 2021Updated 4 years ago
- TransMIL: Transformer based Correlated Multiple Instance Learning for Whole Slide Image Classification☆461May 3, 2024Updated last year
- End-to-end pipeline to go from raw H&E slides to normalised extracted features for training☆27Mar 20, 2024Updated last year
- A transformer-based weakly supervised computational pathology method for clinical-grade diagnosis and molecular state revelation of gliom…☆39Dec 11, 2024Updated last year
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆504Updated this week
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆110Nov 8, 2025Updated 3 months ago
- DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image☆455Apr 29, 2024Updated last year
- cell graph convolutional network☆69Oct 25, 2020Updated 5 years ago
- Official code for the paper "A Good Feature Extractor Is All You Need for Weakly Supervised Pathology Slide Classification"☆18Aug 17, 2024Updated last year
- Use this to download all elements of the BCSS dataset described in: Amgad M, Elfandy H, ..., Gutman DA, Cooper LAD. Structured crowdsourc…☆175Apr 1, 2022Updated 3 years ago
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆22Aug 17, 2020Updated 5 years ago
- ☆18Jun 18, 2021Updated 4 years ago
- ☆19Jul 4, 2023Updated 2 years ago
- cGAN-based Multi Organ Nuclei Segmentation☆195Jun 10, 2022Updated 3 years ago
- Open source tools for computational pathology - Nature BME☆1,607Apr 14, 2025Updated 10 months ago