Alternatives and similar repositories for CRANE

Users that are interested in CRANE are comparing it to the libraries listed below

• KatherLab / HIA
  Histopathology Image Analysis
  ☆92Updated 2 years ago
• KatherLab / preProcessing
  ☆45Updated 2 years ago
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆55Updated 2 years ago
• vqdang / H2T
  ☆35Updated 2 years ago
• clemsgrs / hs2p
  Histopathology Slides Preprocessing Pipeline
  ☆40Updated 3 months ago
• kevindehaan / stain-transformation
  ☆40Updated 3 years ago
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆22Updated last year
• wenqi006 / SlideGraph
  ☆56Updated 3 years ago
• AGFoersch / MultiStainDeepLearning
  Code from Foersch et al. (Under Construction / Development)
  ☆37Updated 2 years ago
• DIAGNijmegen / pathology-hooknet
  ☆62Updated 9 months ago
• TissueImageAnalytics / CoNIC
  CoNIC Challenge
  ☆66Updated last year
• lucasrla / wsi-preprocessing
  Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning
  ☆55Updated last year
• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆81Updated this week
• MHMAILab / auto_lymph
  Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning
  ☆36Updated 4 years ago
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆104Updated 7 months ago
• YashSharma / C2C
  Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.
  ☆61Updated 3 years ago
• franciszchen / PTree-Net
  The source code of 'Diagnose Like A Pathologist: Weakly-Supervised Pathologist-Tree Network for Slide-Level Immunohistochemical Scoring' …
  ☆24Updated 4 years ago
• mahmoodlab / varpool
  Variance pooling to incorporate ITH in CPath models - MICCAI 2022
  ☆25Updated 2 years ago
• KatherLab / end2end-WSI-preprocessing
  End-to-end pipeline to go from raw H&E slides to normalised extracted features for training
  ☆26Updated last year
• jlevy44 / WSI-GTFE
  Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.
  ☆23Updated 4 years ago
• histocartography / hact-net
  ☆71Updated 4 years ago
• SBU-BMI / quip_cancer_segmentation
  ☆16Updated 2 years ago
• Cassie07 / Review_Molecular_profile_prediction_GNN
  [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…
  ☆24Updated last year
• TissueImageAnalytics / TILAb-Score
  This repository contains the implementation of TILAb-score as described in the original paper.
  ☆18Updated 5 years ago
• DataX-JieHao / PAGE-Net
  A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data
  ☆18Updated 5 years ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆33Updated last year
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆54Updated 3 years ago
• KatherLab / cancer-metadata
  machine-readable information for the TCGA dataset, mirrored from other sources
  ☆20Updated 3 years ago
• AdalbertoCq / Histomorphological-Phenotype-Learning
  Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…
  ☆68Updated 5 months ago
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆57Updated 2 years ago