Alternatives and similar repositories for CRANE

Users that are interested in CRANE are comparing it to the libraries listed below

• KatherLab / HIA
  Histopathology Image Analysis
  ☆92Updated last year
• KatherLab / preProcessing
  ☆45Updated 2 years ago
• lucasrla / wsi-preprocessing
  Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning
  ☆55Updated last year
• PathologyDataScience / HiPS
  Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis
  ☆29Updated last year
• wenqi006 / SlideGraph
  ☆55Updated 3 years ago
• Paige-AI / paige-ml-sdk
  This package provides tools for training supervised machine learning models for computational pathology tasks using tile-level embeddings…
  ☆38Updated last month
• AdalbertoCq / Histomorphological-Phenotype-Learning
  Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…
  ☆66Updated 4 months ago
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆21Updated last year
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆54Updated 2 years ago
• AGFoersch / MultiStainDeepLearning
  Code from Foersch et al. (Under Construction / Development)
  ☆36Updated last year
• vqdang / H2T
  ☆35Updated 2 years ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆33Updated last year
• qinghezeng / Histo2GeneSignatures
  Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images
  ☆19Updated 11 months ago
• MarvinLer / SparseConvMIL
  Sparse Convolutional Context-Aware Multiple Instance Learning for Whole Slide Image Classification | https://arxiv.org/abs/2105.02726
  ☆25Updated 3 years ago
• mahmoodlab / varpool
  Variance pooling to incorporate ITH in CPath models - MICCAI 2022
  ☆24Updated 2 years ago
• TissueImageAnalytics / CoNIC
  CoNIC Challenge
  ☆63Updated last year
• KatherLab / EAGLE
  Efficient Approach for Guided Local Examination in Digital Pathology
  ☆23Updated last month
• clemsgrs / hs2p
  Histopathology Slides Preprocessing Pipeline
  ☆38Updated 3 months ago
• kevindehaan / stain-transformation
  ☆40Updated 3 years ago
• Biooptics2021 / PathFinder
  ☆52Updated 2 years ago
• agentdr1 / LA_MIL
  Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch
  ☆24Updated last year
• histocartography / hact-net
  ☆71Updated 4 years ago
• DIAGNijmegen / pathology-hooknet
  ☆61Updated 9 months ago
• huangzhii / IMPRESS
  ☆20Updated 2 years ago
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆35Updated last year
• KatherLab / end2end-WSI-preprocessing
  End-to-end pipeline to go from raw H&E slides to normalised extracted features for training
  ☆26Updated last year
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆56Updated 2 years ago
• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆80Updated this week
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆49Updated 3 months ago
• mahmoodlab / TriPath
  Analysis of 3D pathology samples using weakly supervised AI - Cell
  ☆101Updated 5 months ago