mooch443 / trexLinks
TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.
☆94Updated this week
Alternatives and similar repositories for trex
Users that are interested in trex are comparing it to the libraries listed below
Sorting:
- ☆111Updated 6 months ago
- a module for kinematic analysis of deeplabcut outputs☆142Updated last year
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆198Updated last year
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆49Updated last year
- R Scripts to analyze deep lab cut point data and related data☆67Updated 2 years ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆30Updated 2 weeks ago
- Free, platform independent, behavior tracking software.☆136Updated 3 weeks ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆190Updated 9 months ago
- Quantify user-defined behaviors.☆79Updated this week
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆58Updated 2 years ago
- ☆91Updated last week
- Animal Part Tracker☆82Updated this week
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 9 months ago
- Various scripts to support deeplabcut and what to do afterwards!☆155Updated 2 weeks ago
- SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers☆328Updated this week
- Python package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.☆46Updated 10 months ago
- Janelia Animal Behavior Detector☆81Updated this week
- An active learning platform for expert-guided, data efficient discovery of behavior.☆59Updated last month
- a Python API to record video & system timestamps from Imaging Source USB cameras☆67Updated 2 years ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆29Updated last month
- DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.☆25Updated last year
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆51Updated last month
- Sample implementation of the MotionMapper behavioral analysis algorithms☆79Updated 4 years ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆169Updated 3 months ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆33Updated 4 years ago
- DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition☆45Updated 2 weeks ago
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆56Updated 6 months ago
- SLEAP to Anipose triangulation pipeline for 3D multi-animal pose tracking.☆20Updated 9 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆52Updated 5 months ago