mooch443 / trexLinks
TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.
☆100Updated last week
Alternatives and similar repositories for trex
Users that are interested in trex are comparing it to the libraries listed below
Sorting:
- a module for kinematic analysis of deeplabcut outputs☆143Updated last year
- ☆113Updated last month
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆201Updated last year
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆33Updated last week
- R Scripts to analyze deep lab cut point data and related data☆67Updated 2 years ago
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆51Updated last year
- Python package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.☆46Updated last month
- Quantify user-defined behaviors.☆90Updated last week
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆60Updated 2 years ago
- ☆96Updated last week
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆193Updated 11 months ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆62Updated 3 months ago
- Free, platform independent, behavior tracking software.☆139Updated 2 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 11 months ago
- Various scripts to support deeplabcut and what to do afterwards!☆156Updated 2 months ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- Sample implementation of the MotionMapper behavioral analysis algorithms☆81Updated 5 years ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆51Updated 3 months ago
- Janelia Animal Behavior Detector☆81Updated 2 weeks ago
- a Python API to record video & system timestamps from Imaging Source USB cameras☆67Updated 2 years ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆29Updated 3 months ago
- Animal Part Tracker☆84Updated last week
- ☆52Updated last year
- Code package that allows meta analyses of unsupervised behavior results☆16Updated 3 months ago
- SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers☆333Updated this week
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆57Updated 3 weeks ago
- ☆19Updated last year
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 7 months ago
- DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition☆47Updated last week
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆175Updated last month