mooch443 / trexLinks
TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.
☆107Updated last week
Alternatives and similar repositories for trex
Users that are interested in trex are comparing it to the libraries listed below
Sorting:
- ☆115Updated 3 months ago
- a module for kinematic analysis of deeplabcut outputs☆144Updated last year
- R Scripts to analyze deep lab cut point data and related data☆68Updated 2 years ago
- ☆97Updated 3 weeks ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆202Updated last year
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆61Updated 2 years ago
- Python package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.☆46Updated 3 months ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆195Updated last year
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆52Updated last year
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆36Updated 2 months ago
- Quantify user-defined behaviors.☆98Updated 3 weeks ago
- Various scripts to support deeplabcut and what to do afterwards!☆156Updated 4 months ago
- a Python API to record video & system timestamps from Imaging Source USB cameras☆67Updated 2 years ago
- SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers☆341Updated last week
- Animal Part Tracker☆85Updated this week
- An active learning platform for expert-guided, data efficient discovery of behavior.☆63Updated 5 months ago
- Free, platform independent, behavior tracking software.☆142Updated 5 months ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆33Updated 5 months ago
- SLEAP to Anipose triangulation pipeline for 3D multi-animal pose tracking.☆25Updated last year
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆52Updated 5 months ago
- GUI to run DeepLabCut on live video feed☆64Updated last year
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆179Updated 3 months ago
- Sample implementation of the MotionMapper behavioral analysis algorithms☆81Updated 5 years ago
- A deep learning framework for multi-animal pose tracking.☆529Updated 2 weeks ago
- DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition☆51Updated this week
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆60Updated last month
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 8 months ago
- ☆237Updated 6 months ago