mooch443 / trexLinks
TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.
☆98Updated last week
Alternatives and similar repositories for trex
Users that are interested in trex are comparing it to the libraries listed below
Sorting:
- ☆113Updated 2 weeks ago
- a module for kinematic analysis of deeplabcut outputs☆142Updated last year
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆200Updated last year
- Python package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.☆46Updated 3 weeks ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆193Updated 10 months ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆32Updated this week
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆50Updated last year
- Quantify user-defined behaviors.☆90Updated this week
- R Scripts to analyze deep lab cut point data and related data☆67Updated 2 years ago
- ☆94Updated last month
- Free, platform independent, behavior tracking software.☆139Updated 2 months ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆60Updated 2 years ago
- SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers☆332Updated this week
- An active learning platform for expert-guided, data efficient discovery of behavior.☆61Updated 2 months ago
- Various scripts to support deeplabcut and what to do afterwards!☆156Updated last month
- Sample implementation of the MotionMapper behavioral analysis algorithms☆80Updated 4 years ago
- a Python API to record video & system timestamps from Imaging Source USB cameras☆67Updated 2 years ago
- Janelia Animal Behavior Detector☆81Updated last month
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆57Updated 7 months ago
- DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.☆26Updated last year
- ☆19Updated last year
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 4 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 10 months ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆29Updated 2 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆174Updated last month
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆51Updated 2 months ago
- Deep Imputation for Skeleton data☆21Updated last month
- Code package that allows meta analyses of unsupervised behavior results☆16Updated 2 months ago
- A modular package to control stimulation and track behaviour☆46Updated 9 months ago