zwicker-group / tutorial-pattern-formation-in-cells
Tutorial on "Simulations of pattern formation in biological cells"
☆12Updated 6 months ago
Alternatives and similar repositories for tutorial-pattern-formation-in-cells:
Users that are interested in tutorial-pattern-formation-in-cells are comparing it to the libraries listed below
- PyStokes: phoresis and Stokesian hydrodynamics in Python. github.com/rajeshrinet/pystokes☆47Updated 2 weeks ago
- Python implementation of the force and diffusion inference method described in (Frishman and Ronceray, Phys. Rev. X 10, 021009, 2020).☆28Updated 2 years ago
- Multiblob method for rigid bodies☆34Updated last month
- Soft Active Matter on Surfaces☆30Updated 4 months ago
- A python script to solve the Cahn-Hilliard equation using an implicit pseudospectral method☆39Updated 8 months ago
- QuantImPy, a Python library for scientific image processing.☆14Updated 2 years ago
- Advanced Coarse-Grained Membrane Simulation☆13Updated 3 months ago
- 3D computational model for lipid membranes☆22Updated last month
- Python implementation of Underdamped Langevin Inference, a method to infer the dynamical equation of underdamped stochastic systems from …☆16Updated 2 years ago
- Library for solving time dependent PDEs in FEniCS using Runge-Kutta ESDIRK methods☆12Updated 5 years ago
- ☆36Updated 3 years ago
- kramersmoyal: Kramers-Moyal coefficients for stochastic data of any dimension, to any desired order☆72Updated 3 months ago
- GPU-accelerated simulations of Voronoi and vertex models of cells. Initial version published in Computer Physics Communications: https://…☆21Updated 3 weeks ago
- Methods and code for J. L. Callaham, J. N. Kutz, B. W. Brunton, and S. L. Brunton (2020)☆56Updated 4 years ago
- KITP tutorial codes for Active Brownian Particles☆12Updated 3 years ago
- Class materials for computational physics course☆152Updated 2 months ago
- Implementation of Stokesian Dynamics in Python☆30Updated this week
- A python code to calculate the Brownian motion of colloidal particles in a time varying force field.☆20Updated 4 months ago
- FEniCS tutorial prepared for the KITP Active Matter workshop (https://www.kitp.ucsb.edu/activities/active20)☆17Updated 4 years ago
- The algorithmic differentation tool pyadjoint and add-ons.☆94Updated this week
- Numerically solve the Fokker-Planck equation in N dimensions☆88Updated last year
- Code for "Nonlinear stochastic modeling with Langevin regression" J. L. Callaham, J.-C. Loiseau, G. Rigas, and S. L. Brunton☆25Updated 3 years ago
- FEniCS on GPU takes advantage of CUDA cores to solve SPARSE matrix using cuPy and SciPy libraries.☆18Updated 3 years ago
- Numerical Gaussian Processes for Time-dependent and Non-linear Partial Differential Equations☆67Updated 4 years ago
- Stiff-PINN: Physics-Informed Neural Network for Stiff Chemical Kinetics☆56Updated 2 years ago
- multiphenicsx - easy prototyping of multiphysics problems in FEniCSx☆54Updated last week
- Python version of Rick Chartrand's algorithm for numerical differentiation of noisy data☆70Updated 4 years ago
- Two Dimensional Fokker-Planck Solver using Matlab☆19Updated 5 years ago
- Reaction diffusion system prediction based on convolutional neural network☆16Updated 2 years ago
- Simple OOP Python Code to run some Pseudo-Spectral 2D Simulations of Turbulence☆65Updated 2 years ago