This repository contains code used for the fly brain activity experiments
☆18Apr 26, 2023Updated 3 years ago
Alternatives and similar repositories for FlyLFM
Users that are interested in FlyLFM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)☆28Feb 26, 2020Updated 6 years ago
- R package containing the functions used to build the Database of Odor Responses☆11Aug 18, 2026Updated last month
- The Browsable Atlas of Behavior-Anatomy Maps (BABAM) is a GUI for exploring hypotheses of correlations between neural activity in regions…☆13May 17, 2023Updated 3 years ago
- Differentiable 4f microscope/phase mask simulation☆10Feb 23, 2025Updated last year
- Real-Time Light Field 3D Microscopy via Sparsity-Driven Learned Deconvolution☆11Nov 2, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- argus_gui is a python package with multiple tools for 3D camera calibration and reconstruction. Argus Panoptes had thousands of eyes, but…☆12Updated this week
- ☆12Oct 5, 2016Updated 9 years ago
- MATLAB utility to switch between Anaconda environments☆20Jan 17, 2023Updated 3 years ago
- 3D/4D volumetric rendering of microscopy data☆27Jul 15, 2026Updated 2 months ago
- R package implementing the NBLAST neuron search algorithm, as an add-on for the NeuroAnatomy Toolbox (nat) R package.☆18Aug 24, 2026Updated 3 weeks ago
- Open source repository for Computational Miniature Mesoscope (CM2) @ BU-CISL☆15Aug 29, 2022Updated 4 years ago
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆27Apr 11, 2025Updated last year
- Python implementation of fast-oopsi, smc-oopsi, wiener, and discretize with binning☆15May 17, 2022Updated 4 years ago
- Markerless pose estimation of user-defined features with deep learning for all animals, including humans☆16Nov 26, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Simple GUI frontend for CMTK image registration tools in Fiji/ImageJ☆14Nov 7, 2017Updated 8 years ago
- MATLAB Streaming Image Viewer - a viewing and analysis platform for ultra-large 3D imaging data☆13Jul 15, 2020Updated 6 years ago
- A library to try and extend Compose.jl to 3D.☆20Nov 16, 2015Updated 10 years ago
- Multiscale Image Restoration for fluorescence microscopy☆10Jun 17, 2023Updated 3 years ago
- A modular package to control stimulation and track behaviour☆50Nov 8, 2024Updated last year
- High-throughput real-time tracker for delivery of stimuli and measurement of animal behavior.☆24Jan 4, 2026Updated 8 months ago
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆738Aug 2, 2026Updated last month
- Implementation of Implicit Graphon Neural Representation☆14Sep 1, 2023Updated 3 years ago
- Implementation of the Bayesian Microsaccade Detection algorithm described in Mihali, van Opheusden, and Ma, 2017, Journal of Vision☆10Dec 12, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- a repository containing everything relevant to our fast non-negative deconvolution work☆35Nov 28, 2016Updated 9 years ago
- Python client utilties for interacting with the neuPrint connectome analysis service☆81Jul 20, 2026Updated 2 months ago
- Fractional ridge regression☆51Feb 10, 2026Updated 7 months ago
- Targeted Maximum Likelihood Estimation for Network Data☆20Aug 29, 2017Updated 9 years ago
- Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18☆30Mar 7, 2019Updated 7 years ago
- Automatic ROI Detection☆19Nov 10, 2015Updated 10 years ago
- ☆20Oct 16, 2018Updated 7 years ago
- Compression, denoising and demixing of functional imaging recordings☆31Jul 11, 2018Updated 8 years ago
- ☆10Jan 16, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆37Aug 27, 2026Updated 3 weeks ago
- A fully differentiable implementation of SHA256☆11Nov 12, 2021Updated 4 years ago
- Tools and scripts for EASI-FISH image data analysis☆17Jul 24, 2026Updated last month
- ☆12May 21, 2025Updated last year
- Julia API for Ray☆12Mar 6, 2026Updated 6 months ago
- ☆17Feb 23, 2024Updated 2 years ago
- Development of PICASSO plugin for napari☆16Jan 17, 2023Updated 3 years ago