KordingLab / spykesML
A class for using ML algorithms for spike prediction
☆59Updated 7 years ago
Alternatives and similar repositories for spykesML:
Users that are interested in spykesML are comparing it to the libraries listed below
- Tools for spike data analysis and visualization☆104Updated 2 years ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆37Updated 5 years ago
- YASS: Yet Another Spike Sorter☆66Updated 2 years ago
- Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data☆92Updated 2 years ago
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆44Updated 5 years ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 2 months ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆68Updated 4 years ago
- ☆50Updated 4 years ago
- Deconvolution of calcium imaging data☆86Updated 3 weeks ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆38Updated 6 months ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆49Updated 3 years ago
- Functions to assess quality of spike sorting results☆32Updated last year
- Recordings of 10k neurons during spontaneous behaviors☆50Updated 10 months ago
- Neural Spike Train Analysis Toolbox for Matlab☆34Updated 7 years ago
- Fast and scalable spike sorting in python☆88Updated last year
- Python tools for analysis of neurophysiology data☆36Updated last year
- non-parametric inference for convolutional filters in poisson glms☆13Updated 3 years ago
- IaC codebase for the NeuroCAAS Platform☆36Updated last year
- Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)☆12Updated 10 years ago
- spike sorting software☆25Updated 6 years ago
- IBL core shared libraries☆62Updated this week
- Code accompanying Steinmetz et al., 2019☆57Updated 3 years ago
- WIP: Python port of Kilosort2☆50Updated last year
- Coding exercises for Neural Data Science at CSHL in 2019☆28Updated 4 years ago
- Pytorch implementation of LocaNMF☆34Updated 5 years ago
- Interpretable neural spike train models with fully-Bayesian inference algorithms☆47Updated 6 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆54Updated this week
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆19Updated 7 years ago
- Automatic spike sorting, cluster visualization, spike sorting GUIs☆44Updated last year