Alternatives and similar repositories for spykesML:

Users that are interested in spykesML are comparing it to the libraries listed below

• KordingLab / spykes
  Tools for spike data analysis and visualization
  ☆104Updated 2 years ago
• j-friedrich / OASIS
  Deconvolution of calcium imaging data
  ☆93Updated 2 months ago
• pillowlab / GLMspiketools
  Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).
  ☆37Updated 5 years ago
• pillowlab / GLMspiketraintutorial
  Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data
  ☆94Updated 2 years ago
• pillowlab / neuroGLM
  Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).
  ☆68Updated 4 years ago
• AllenInstitute / neuroglia
  a Python machine learning library for neurophysiology data
  ☆36Updated 6 years ago
• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆35Updated 5 years ago
• nicholas-roy / psytrack
  ☆50Updated last month
• MouseLand / stringer-pachitariu-et-al-2018a
  Recordings of 10k neurons during spontaneous behaviors
  ☆50Updated last year
• int-brain-lab / mtscomp
  Multichannel time series lossless compression in pure Python based on NumPy and zlib
  ☆39Updated last month
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆45Updated 5 years ago
• dmeliza / biopreprint
  Preprint classes for biological journals
  ☆30Updated 4 years ago
• baccuslab / pyret
  Python tools for analysis of neurophysiology data
  ☆37Updated last year
• paninski-lab / yass
  YASS: Yet Another Spike Sorter
  ☆66Updated 2 years ago
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆56Updated this week
• iahncajigas / nSTAT
  Neural Spike Train Analysis Toolbox for Matlab
  ☆34Updated 7 years ago
• ahwillia / tensortools
  A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA
  ☆33Updated last year
• slinderman / pyglm
  Interpretable neural spike train models with fully-Bayesian inference algorithms
  ☆47Updated 6 years ago
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated this week
• catniplab / vlgp
  Dimensionality reduction of spikes trains
  ☆49Updated 3 years ago
• marius10p / NeuralDataScienceCSHL2019
  Coding exercises for Neural Data Science at CSHL in 2019
  ☆28Updated 4 years ago
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆32Updated last year
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆95Updated last week
• nsteinme / steinmetz-et-al-2019
  Code accompanying Steinmetz et al., 2019
  ☆59Updated 3 years ago
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆51Updated last month
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆49Updated last month
• lfads / lfads-run-manager
  Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)
  ☆49Updated 3 years ago
• cunningham-lab / neurocaas
  IaC codebase for the NeuroCAAS Platform
  ☆37Updated last year
• pillowlab / GLMspiketraintutorial_python
  ☆49Updated 2 years ago
• catniplab / NPGLM
  non-parametric inference for convolutional filters in poisson glms
  ☆13Updated 3 years ago