Alternatives and similar repositories for MIMIC-IV-Data-Pipeline

Users that are interested in MIMIC-IV-Data-Pipeline are comparing it to the libraries listed below

• nliulab / mimic4ed-benchmark
  Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.
  ☆84Updated 2 years ago
• rvandewater / YAIB
  🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…
  ☆75Updated last week
• ipolharvard / ethos-paper
  ☆76Updated 6 months ago
• MLforHealth / MIMIC_Extract
  MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III
  ☆449Updated last year
• lrsoenksen / HAIM
  This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…
  ☆130Updated 2 weeks ago
• ratschlab / HIRID-ICU-Benchmark
  Repository for the HiRID ICU Benchmark (HiB) project
  ☆58Updated 2 years ago
• deepmedicine / BEHRT
  Code for BEHRT: Transformer for Electronic Health Records
  ☆114Updated 2 years ago
• AmsterdamUMC / AmsterdamUMCdb
  AmsterdamUMCdb - Freely Accessible ICU database. Please access our Open Access manuscript at https://doi.org/10.1097/CCM.0000000000004916
  ☆185Updated 8 months ago
• MIT-LCP / eicu-code
  Code and website related to the eICU Collaborative Research Database
  ☆357Updated 8 months ago
• USM-CHU-FGuyon / BlendedICU
  OMOP standardization pipeline for ICU databases
  ☆44Updated 6 months ago
• justin13601 / ACES
  [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams
  ☆36Updated 3 months ago
• ZhiGroup / pytorch_ehr
  source codes based on PyTorch to analyze EHR
  ☆147Updated last year
• som-shahlab / femr
  FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…
  ☆155Updated this week
• Medical-Event-Data-Standard / meds
  Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data
  ☆74Updated last month
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆96Updated 2 months ago
• MIT-LCP / mimic-iv
  Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code
  ☆286Updated 4 years ago
• microsoft / mimic_sepsis
  Sepsis cohort from MIMIC dataset
  ☆122Updated 2 years ago
• ratschlab / circEWS
  circEWS public code
  ☆71Updated 10 months ago
• ipolharvard / ethos-ares
  ☆25Updated last month
• alistairewj / sepsis3-mimic
  Evaluation of the Sepsis-3 guidelines in MIMIC-III
  ☆197Updated 3 years ago
• som-shahlab / ehrshot-benchmark
  A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)
  ☆190Updated 3 months ago
• whaleloops / TransformEHR
  ☆43Updated last year
• Medical-Event-Data-Standard / meds_etl
  A collection of ETLs from common data formats to Medical Event Data Standard
  ☆33Updated last month
• ZhiGroup / CovRNN
  ☆13Updated 3 years ago
• MLD3 / FIDDLE-experiments
  Experiments applying FIDDLE on MIMIC-III and eICU. https://doi.org/10.1093/jamia/ocaa139
  ☆25Updated 3 years ago
• alistairewj / mimic-iv-aline-study
  Replication of the arterial line study in MIMIC-IV
  ☆73Updated 3 years ago
• vanderschaarlab / autoprognosis
  A system for automating the design of predictive modeling pipelines tailored for clinical prognosis.
  ☆159Updated 5 months ago
• som-shahlab / hf_ehr
  Training HuggingFace models on EHR data
  ☆29Updated last month
• USC-Melady / Benchmarking_DL_MIMICIII
  ☆130Updated 11 months ago
• ZhiGroup / Med-BERT
  Med-BERT, contextualized embedding model for structured EHR data
  ☆301Updated last year