sunlabuiuc / PyHealth
A Deep Learning Python Toolkit for Healthcare Applications.
☆1,011Updated 2 months ago
Alternatives and similar repositories for PyHealth:
Users that are interested in PyHealth are comparing it to the libraries listed below
- MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III☆424Updated 6 months ago
- Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.☆419Updated 2 years ago
- A customizable pipeline for data extraction from MIMIC-IV.☆199Updated last year
- ☆222Updated 3 years ago
- Python suite to construct benchmark machine learning datasets from the MIMIC-III 💊 clinical database.☆815Updated last year
- Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code☆269Updated 3 years ago
- Code and website related to the eICU Collaborative Research Database☆330Updated last month
- source codes based on PyTorch to analyze EHR☆132Updated 11 months ago
- A curated list of ML|NLP resources for healthcare.☆460Updated last year
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆389Updated 2 years ago
- ☆127Updated 3 months ago
- Med-BERT, contextualized embedding model for structured EHR data☆278Updated 11 months ago
- Code for BEHRT: Transformer for Electronic Health Records☆108Updated last year
- Evaluation of the Sepsis-3 guidelines in MIMIC-III☆191Updated 2 years ago
- 🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…☆58Updated last month
- Medical Concept Annotation Tool☆468Updated last week
- AmsterdamUMCdb - Freely Accessible ICU database. Please access our Open Access manuscript at https://doi.org/10.1097/CCM.0000000000004916☆161Updated this week
- repository for Publicly Available Clinical BERT Embeddings☆684Updated 4 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆91Updated 7 months ago
- This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…☆109Updated last year
- RETAIN: Interpretable Predictive Model in Healthcare using Reverse Time Attention Mechanism☆213Updated 7 years ago
- MiME Repository☆105Updated 5 years ago
- OMOP standardization pipeline for ICU databases☆35Updated 6 months ago
- Code for "Graph Neural Network on Electronic Health Records for Predicting Alzheimer’s Disease"☆256Updated 4 months ago
- Sepsis Prediction on MIMIC☆69Updated 3 years ago
- Clairvoyance: a Unified, End-to-End AutoML Pipeline for Medical Time Series☆125Updated 2 years ago
- ☆46Updated last month
- Graph-based Attention Model☆241Updated last year
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆145Updated last month
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆120Updated 2 weeks ago