A Deep Learning Python Toolkit for Healthcare Applications.
☆1,645Aug 9, 2026Updated this week
Alternatives and similar repositories for PyHealth
Users that are interested in PyHealth are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python suite to construct benchmark machine learning datasets from the MIMIC-III 💊 clinical database.☆891Apr 16, 2023Updated 3 years ago
- IJCAI2021: Code for SafeDrug, MIMIC data processing, Medical code mapping☆98Aug 1, 2023Updated 3 years ago
- MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III☆485Jul 18, 2024Updated 2 years ago
- MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases☆3,337Updated this week
- A curated list of ML|NLP resources for healthcare.☆489Mar 26, 2023Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- source codes based on PyTorch to analyze EHR☆150Jan 22, 2024Updated 2 years ago
- Source code for StageNet: Stage-Aware Neural Networks for Health Risk Prediction☆33May 7, 2025Updated last year
- A customizable pipeline for multimodal data extraction from MIMIC-IV!☆349Jul 6, 2026Updated last month
- Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.☆430Oct 7, 2022Updated 3 years ago
- Medical Concept Annotation Tool☆532Jul 25, 2025Updated last year
- GAMENet : Graph Augmented MEmory Networks for Recommending Medication Combination☆152Nov 11, 2018Updated 7 years ago
- ☆234Sep 1, 2021Updated 4 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆100Mar 19, 2026Updated 4 months ago
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆130Jun 12, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- 🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…☆104Jun 8, 2026Updated 2 months ago
- ☆15Dec 18, 2021Updated 4 years ago
- [ICLR'24] Enhancing Healthcare Predictions with Personalized Knowledge Graphs☆211Feb 18, 2025Updated last year
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆180Jul 13, 2026Updated 3 weeks ago
- ☆14Aug 9, 2024Updated 2 years ago
- Source code for a comprehensive analysis of MTL over EHR timeseries data.☆37Apr 11, 2023Updated 3 years ago
- The official implementation of our paper "MoleRec: Combinatorial Drug Recommendation with Substructure-Aware Molecular Representation Lea…☆69Jun 8, 2023Updated 3 years ago
- RETAIN: Interpretable Predictive Model in Healthcare using Reverse Time Attention Mechanism☆226Nov 4, 2017Updated 8 years ago
- Python tools for healthcare machine learning☆330Apr 16, 2019Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- circEWS public code☆80Oct 30, 2024Updated last year
- Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code☆304Jun 17, 2021Updated 5 years ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆231Jun 6, 2025Updated last year
- ☆39Feb 14, 2020Updated 6 years ago
- Code and website related to the eICU Collaborative Research Database☆402Dec 19, 2024Updated last year
- Electronic Health Record Analysis with Python.☆359Updated this week
- General Healthcare Predictive Framework☆24Dec 6, 2025Updated 8 months ago
- [arXiv'24] The official implementation code of LEADER.☆43Aug 31, 2024Updated last year
- ☆43May 22, 2023Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- TemporAI: ML-centric Toolkit for Medical Time Series☆129Dec 14, 2023Updated 2 years ago
- [ACL 2024] This is the code for our paper ”RAM-EHR: Retrieval Augmentation Meets Clinical Predictions on Electronic Health Records“.☆42Sep 19, 2024Updated last year
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆446Oct 17, 2022Updated 3 years ago
- NeurIPS'24 DB (Spotlight) | Instruction Tuning Large Language Models to Understand Electronic Health Records☆61Jul 17, 2026Updated 3 weeks ago
- MetaPred: Meta-Learning for Clinical Risk Prediction with Limited Patient Electronic Health Records (KDD 2019)☆49Mar 29, 2020Updated 6 years ago
- ☆12Apr 3, 2022Updated 4 years ago
- Python package for machine learning for healthcare using a OMOP common data model☆111Jun 17, 2023Updated 3 years ago