Alternatives and similar repositories for PyHealth:

Users that are interested in PyHealth are comparing it to the libraries listed below

• hurcy / awesome-ehr-deeplearning
  Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.
  ☆424Updated 2 years ago
• MLforHealth / MIMIC_Extract
  MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III
  ☆436Updated 8 months ago
• healthylaife / MIMIC-IV-Data-Pipeline
  A customizable pipeline for data extraction from MIMIC-IV.
  ☆212Updated last year
• Google-Health / records-research
  ☆223Updated 3 years ago
• kexinhuang12345 / clinicalBERT
  ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)
  ☆412Updated 2 years ago
• MIT-LCP / eicu-code
  Code and website related to the eICU Collaborative Research Database
  ☆336Updated 3 months ago
• isaacmg / healthcare_ml
  A curated list of ML|NLP resources for healthcare.
  ☆460Updated 2 years ago
• NYUMedML / GNN_for_EHR
  Code for "Graph Neural Network on Electronic Health Records for Predicting Alzheimer’s Disease"
  ☆263Updated 6 months ago
• ZhiGroup / pytorch_ehr
  source codes based on PyTorch to analyze EHR
  ☆135Updated last year
• ZhiGroup / Med-BERT
  Med-BERT, contextualized embedding model for structured EHR data
  ☆280Updated last year
• deepmedicine / BEHRT
  Code for BEHRT: Transformer for Electronic Health Records
  ☆109Updated last year
• alistairewj / sepsis3-mimic
  Evaluation of the Sepsis-3 guidelines in MIMIC-III
  ☆192Updated 2 years ago
• theislab / ehrapy
  Electronic Health Record Analysis with Python.
  ☆282Updated last week
• YerevaNN / mimic3-benchmarks
  Python suite to construct benchmark machine learning datasets from the MIMIC-III 💊 clinical database.
  ☆829Updated last year
• EmilyAlsentzer / clinicalBERT
  repository for Publicly Available Clinical BERT Embeddings
  ☆704Updated 4 years ago
• MIT-LCP / mimic-iv
  Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code
  ☆278Updated 3 years ago
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆92Updated 9 months ago
• som-shahlab / ehrshot-benchmark
  A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)
  ☆161Updated last month
• rvandewater / YAIB
  🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…
  ☆66Updated last month
• CogStack / MedCAT
  Medical Concept Annotation Tool
  ☆480Updated this week
• NYUMedML / DeepEHR
  Chronic Disease Prediction Using Medical Notes
  ☆268Updated 5 years ago
• lrsoenksen / HAIM
  This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…
  ☆115Updated last year
• google / ehr-predictions
  ☆101Updated 3 years ago
• mims-harvard / TDC
  Therapeutics Commons (TDC-2): Multimodal Foundation for Therapeutic Science
  ☆1,066Updated last week
• USC-Melady / Benchmarking_DL_MIMICIII
  ☆127Updated 6 months ago
• ipolharvard / ethos-paper
  ☆66Updated 3 weeks ago
• jamesmullenbach / caml-mimic
  multilabel classification of EHR notes
  ☆285Updated 4 years ago
• AmsterdamUMC / AmsterdamUMCdb
  AmsterdamUMCdb - Freely Accessible ICU database. Please access our Open Access manuscript at https://doi.org/10.1097/CCM.0000000000004916
  ☆171Updated 2 months ago
• som-shahlab / femr
  FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…
  ☆136Updated last week
• Jianing-Qiu / Awesome-Healthcare-Foundation-Models
  ☆445Updated last month