A Deep Learning Python Toolkit for Healthcare Applications.
β1,650Aug 20, 2026Updated last week
Alternatives and similar repositories for PyHealth
Users that are interested in PyHealth are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python suite to construct benchmark machine learning datasets from the MIMIC-III π clinical database.β890Apr 16, 2023Updated 3 years ago
- IJCAI2021: Code for SafeDrug, MIMIC data processing, Medical code mappingβ98Aug 1, 2023Updated 3 years ago
- MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-IIIβ489Jul 18, 2024Updated 2 years ago
- MIMIC Code Repository: Code shared by the research community for the MIMIC family of databasesβ3,358Updated this week
- A curated list of ML|NLP resources for healthcare.β491Mar 26, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- source codes based on PyTorch to analyze EHRβ150Jan 22, 2024Updated 2 years ago
- Source code for StageNet: Stage-Aware Neural Networks for Health Risk Predictionβ33May 7, 2025Updated last year
- A customizable pipeline for multimodal data extraction from MIMIC-IV!β353Jul 6, 2026Updated last month
- Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.β430Oct 7, 2022Updated 3 years ago
- Medical Concept Annotation Toolβ531Jul 25, 2025Updated last year
- GAMENet : Graph Augmented MEmory Networks for Recommending Medication Combinationβ152Nov 11, 2018Updated 7 years ago
- β234Sep 1, 2021Updated 4 years ago
- FlexIble Data-Driven pipeLinE β a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algoβ¦β100Mar 19, 2026Updated 5 months ago
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims dataβ132Jun 12, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- π§ͺYet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom dataseβ¦β106Jun 8, 2026Updated 2 months ago
- β15Dec 18, 2021Updated 4 years ago
- [ICLR'24] Enhancing Healthcare Predictions with Personalized Knowledge Graphsβ212Feb 18, 2025Updated last year
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health recordβ¦β181Aug 17, 2026Updated last week
- β14Aug 9, 2024Updated 2 years ago
- Source code for a comprehensive analysis of MTL over EHR timeseries data.β37Apr 11, 2023Updated 3 years ago
- The official implementation of our paper "MoleRec: Combinatorial Drug Recommendation with Substructure-Aware Molecular Representation Leaβ¦β69Jun 8, 2023Updated 3 years ago
- RETAIN: Interpretable Predictive Model in Healthcare using Reverse Time Attention Mechanismβ227Nov 4, 2017Updated 8 years ago
- Python tools for healthcare machine learningβ330Apr 16, 2019Updated 7 years ago
- Open source password manager - Proton Pass β’ AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- circEWS public codeβ79Oct 30, 2024Updated last year
- Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-codeβ305Jun 17, 2021Updated 5 years ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)β231Jun 6, 2025Updated last year
- [WWW 2022] "Conditional Generation Net for Medication Recommendation"β42Jul 21, 2022Updated 4 years ago
- β39Feb 14, 2020Updated 6 years ago
- Code and website related to the eICU Collaborative Research Databaseβ403Dec 19, 2024Updated last year
- Electronic Health Record Analysis with Python.β361Updated this week
- General Healthcare Predictive Frameworkβ24Dec 6, 2025Updated 8 months ago
- [arXiv'24] The official implementation code of LEADER.β44Aug 31, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- β43May 22, 2023Updated 3 years ago
- TemporAI: ML-centric Toolkit for Medical Time Seriesβ129Dec 14, 2023Updated 2 years ago
- [ACL 2024] This is the code for our paper βRAM-EHR: Retrieval Augmentation Meets Clinical Predictions on Electronic Health Recordsβ.β42Sep 19, 2024Updated last year
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)β449Oct 17, 2022Updated 3 years ago
- NeurIPS'24 DB (Spotlight) | Instruction Tuning Large Language Models to Understand Electronic Health Recordsβ61Jul 17, 2026Updated last month
- MetaPred: Meta-Learning for Clinical Risk Prediction with Limited Patient Electronic Health Records (KDD 2019)β49Mar 29, 2020Updated 6 years ago
- β12Apr 3, 2022Updated 4 years ago