sunlabuiuc / PyHealthLinks
A Deep Learning Python Toolkit for Healthcare Applications.
☆1,182Updated this week
Alternatives and similar repositories for PyHealth
Users that are interested in PyHealth are comparing it to the libraries listed below
Sorting:
- MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III☆449Updated last year
- Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.☆425Updated 2 years ago
- A customizable pipeline for data extraction from MIMIC-IV.☆241Updated last year
- Code and website related to the eICU Collaborative Research Database☆348Updated 6 months ago
- Python suite to construct benchmark machine learning datasets from the MIMIC-III 💊 clinical database.☆842Updated 2 years ago
- Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code☆284Updated 4 years ago
- Med-BERT, contextualized embedding model for structured EHR data☆290Updated last year
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆422Updated 2 years ago
- source codes based on PyTorch to analyze EHR☆142Updated last year
- Code for BEHRT: Transformer for Electronic Health Records☆111Updated 2 years ago
- ☆222Updated 3 years ago
- AmsterdamUMCdb - Freely Accessible ICU database. Please access our Open Access manuscript at https://doi.org/10.1097/CCM.0000000000004916☆184Updated 6 months ago
- Code for "Graph Neural Network on Electronic Health Records for Predicting Alzheimer’s Disease"☆268Updated 10 months ago
- 🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…☆72Updated this week
- Evaluation of the Sepsis-3 guidelines in MIMIC-III☆196Updated 3 years ago
- MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases☆2,911Updated 2 weeks ago
- Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.☆83Updated 2 years ago
- repository for Publicly Available Clinical BERT Embeddings☆726Updated 4 years ago
- OMOP standardization pipeline for ICU databases☆43Updated 4 months ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆95Updated 3 weeks ago
- ☆129Updated 9 months ago
- A curated list of ML|NLP resources for healthcare.☆470Updated 2 years ago
- Blog post on Medium☆49Updated 2 years ago
- Medical Concept Annotation Tool☆503Updated last week
- ☆72Updated 4 months ago
- This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…☆127Updated 2 years ago
- ☆464Updated last month
- Repository for the HiRID ICU Benchmark (HiB) project☆57Updated 2 years ago
- ☆15Updated 3 years ago
- Replication of the arterial line study in MIMIC-IV☆73Updated 3 years ago