A Deep Learning Python Toolkit for Healthcare Applications.
β1,629Jul 15, 2026Updated this week
Alternatives and similar repositories for PyHealth
Users that are interested in PyHealth are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python suite to construct benchmark machine learning datasets from the MIMIC-III π clinical database.β890Apr 16, 2023Updated 3 years ago
- IJCAI2021: Code for SafeDrug, MIMIC data processing, Medical code mappingβ98Aug 1, 2023Updated 2 years ago
- MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-IIIβ482Jul 18, 2024Updated 2 years ago
- MIMIC Code Repository: Code shared by the research community for the MIMIC family of databasesβ3,309Updated this week
- π§ͺYet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom dataseβ¦β103Jun 8, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A curated list of ML|NLP resources for healthcare.β489Mar 26, 2023Updated 3 years ago
- source codes based on PyTorch to analyze EHRβ151Jan 22, 2024Updated 2 years ago
- Source code for StageNet: Stage-Aware Neural Networks for Health Risk Predictionβ33May 7, 2025Updated last year
- Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.β430Oct 7, 2022Updated 3 years ago
- Medical Concept Annotation Toolβ531Jul 25, 2025Updated 11 months ago
- GAMENet : Graph Augmented MEmory Networks for Recommending Medication Combinationβ152Nov 11, 2018Updated 7 years ago
- β234Sep 1, 2021Updated 4 years ago
- FlexIble Data-Driven pipeLinE β a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algoβ¦β100Mar 19, 2026Updated 4 months ago
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims dataβ128Jun 12, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A customizable pipeline for multimodal data extraction from MIMIC-IV!β343Jul 6, 2026Updated 2 weeks ago
- β15Dec 18, 2021Updated 4 years ago
- [ICLR'24] Enhancing Healthcare Predictions with Personalized Knowledge Graphsβ210Feb 18, 2025Updated last year
- β14Aug 9, 2024Updated last year
- The official implementation of our paper "MoleRec: Combinatorial Drug Recommendation with Substructure-Aware Molecular Representation Leaβ¦β69Jun 8, 2023Updated 3 years ago
- RETAIN: Interpretable Predictive Model in Healthcare using Reverse Time Attention Mechanismβ226Nov 4, 2017Updated 8 years ago
- Python tools for healthcare machine learningβ329Apr 16, 2019Updated 7 years ago
- circEWS public codeβ79Oct 30, 2024Updated last year
- Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-codeβ304Jun 17, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)β227Jun 6, 2025Updated last year
- [WWW 2022] "Conditional Generation Net for Medication Recommendation"β42Jul 21, 2022Updated 4 years ago
- β39Feb 14, 2020Updated 6 years ago
- Code and website related to the eICU Collaborative Research Databaseβ403Dec 19, 2024Updated last year
- Electronic Health Record Analysis with Python.β355Updated this week
- General Healthcare Predictive Frameworkβ24Dec 6, 2025Updated 7 months ago
- [arXiv'24] The official implementation code of LEADER.β43Aug 31, 2024Updated last year
- β43May 22, 2023Updated 3 years ago
- TemporAI: ML-centric Toolkit for Medical Time Seriesβ129Dec 14, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI β’ AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- [ACL 2024] This is the code for our paper βRAM-EHR: Retrieval Augmentation Meets Clinical Predictions on Electronic Health Recordsβ.β42Sep 19, 2024Updated last year
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)β445Oct 17, 2022Updated 3 years ago
- NeurIPS'24 DB (Spotlight) | Instruction Tuning Large Language Models to Understand Electronic Health Recordsβ61Updated this week
- MetaPred: Meta-Learning for Clinical Risk Prediction with Limited Patient Electronic Health Records (KDD 2019)β49Mar 29, 2020Updated 6 years ago
- Python package for machine learning for healthcare using a OMOP common data modelβ111Jun 17, 2023Updated 3 years ago
- ConCare: Personalized Clinical Feature Embedding via Capturing the Healthcare Context (AAAI-2020)β21Nov 24, 2021Updated 4 years ago
- PyPI Package: An easy-to-use medication/drug code mapping toolβ21Aug 17, 2023Updated 2 years ago