A Deep Learning Python Toolkit for Healthcare Applications.
β1,524Apr 26, 2026Updated this week
Alternatives and similar repositories for PyHealth
Users that are interested in PyHealth are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python suite to construct benchmark machine learning datasets from the MIMIC-III π clinical database.β881Apr 16, 2023Updated 3 years ago
- IJCAI2021: Code for SafeDrug, MIMIC data processing, Medical code mappingβ95Aug 1, 2023Updated 2 years ago
- MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-IIIβ476Jul 18, 2024Updated last year
- MIMIC Code Repository: Code shared by the research community for the MIMIC family of databasesβ3,197Apr 14, 2026Updated 2 weeks ago
- π§ͺYet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom dataseβ¦β97Mar 13, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A curated list of ML|NLP resources for healthcare.β480Mar 26, 2023Updated 3 years ago
- source codes based on PyTorch to analyze EHRβ150Jan 22, 2024Updated 2 years ago
- Source code for StageNet: Stage-Aware Neural Networks for Health Risk Predictionβ33May 7, 2025Updated 11 months ago
- Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.β427Oct 7, 2022Updated 3 years ago
- Medical Concept Annotation Toolβ531Jul 25, 2025Updated 9 months ago
- GAMENet : Graph Augmented MEmory Networks for Recommending Medication Combinationβ152Nov 11, 2018Updated 7 years ago
- β232Sep 1, 2021Updated 4 years ago
- FlexIble Data-Driven pipeLinE β a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algoβ¦β99Mar 19, 2026Updated last month
- A customizable pipeline for multimodal data extraction from MIMIC-IV!β321Mar 10, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- [ICLR'24] Enhancing Healthcare Predictions with Personalized Knowledge Graphsβ206Feb 18, 2025Updated last year
- β15Dec 18, 2021Updated 4 years ago
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health recordβ¦β168Apr 13, 2026Updated 2 weeks ago
- β14Aug 9, 2024Updated last year
- Source code for a comprehensive analysis of MTL over EHR timeseries data.β37Apr 11, 2023Updated 3 years ago
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims dataβ111Nov 5, 2025Updated 5 months ago
- The official implementation of our paper "MoleRec: Combinatorial Drug Recommendation with Substructure-Aware Molecular Representation Leaβ¦β68Jun 8, 2023Updated 2 years ago
- RETAIN: Interpretable Predictive Model in Healthcare using Reverse Time Attention Mechanismβ227Nov 4, 2017Updated 8 years ago
- circEWS public codeβ77Oct 30, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- [WWW 2022] "Conditional Generation Net for Medication Recommendation"β41Jul 21, 2022Updated 3 years ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)β215Jun 6, 2025Updated 10 months ago
- Python tools for healthcare machine learningβ329Apr 16, 2019Updated 7 years ago
- Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-codeβ299Jun 17, 2021Updated 4 years ago
- Code and website related to the eICU Collaborative Research Databaseβ391Dec 19, 2024Updated last year
- General Healthcare Predictive Frameworkβ24Dec 6, 2025Updated 4 months ago
- β42May 22, 2023Updated 2 years ago
- [ACL 2024] This is the code for our paper βRAM-EHR: Retrieval Augmentation Meets Clinical Predictions on Electronic Health Recordsβ.β41Sep 19, 2024Updated last year
- [arXiv'24] The official implementation code of LEADER.β43Aug 31, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- NeurIPS'24 DB (Spotlight) | Instruction Tuning Large Language Models to Understand Electronic Health Recordsβ59Sep 10, 2025Updated 7 months ago
- TemporAI: ML-centric Toolkit for Medical Time Series