Alternatives and similar repositories for YAIB

Users that are interested in YAIB are comparing it to the libraries listed below

• ratschlab / HIRID-ICU-Benchmark
  Repository for the HiRID ICU Benchmark (HiB) project
  ☆56Updated last year
• deepmedicine / BEHRT
  Code for BEHRT: Transformer for Electronic Health Records
  ☆110Updated 2 years ago
• lrsoenksen / HAIM
  This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…
  ☆122Updated last year
• ZhiGroup / pytorch_ehr
  source codes based on PyTorch to analyze EHR
  ☆138Updated last year
• nliulab / mimic4ed-benchmark
  Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.
  ☆83Updated 2 years ago
• MLD3 / FIDDLE-experiments
  Experiments applying FIDDLE on MIMIC-III and eICU. https://doi.org/10.1093/jamia/ocaa139
  ☆24Updated 2 years ago
• som-shahlab / femr
  FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…
  ☆142Updated last month
• ratschlab / circEWS
  circEWS public code
  ☆69Updated 7 months ago
• USM-CHU-FGuyon / BlendedICU
  OMOP standardization pipeline for ICU databases
  ☆41Updated 3 months ago
• som-shahlab / hf_ehr
  Taking off-the-shelf HuggingFace models and training them on EHR data
  ☆24Updated 2 months ago
• ipolharvard / ethos-paper
  ☆70Updated 2 months ago
• Medical-Event-Data-Standard / meds_etl
  A collection of ETLs from common data formats to Medical Event Data Standard
  ☆29Updated last month
• justin13601 / ACES
  [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams
  ☆33Updated 3 weeks ago
• healthylaife / MIMIC-IV-Data-Pipeline
  A customizable pipeline for data extraction from MIMIC-IV.
  ☆232Updated last year
• Medical-Event-Data-Standard / meds
  Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data
  ☆62Updated 3 weeks ago
• cumc-dbmi / cehrbert
  CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks
  ☆35Updated 2 weeks ago
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆93Updated 11 months ago
• EmmaRocheteau / TPC-LoS-prediction
  This repository contains the code used for Temporal Pointwise Convolutional Networks for Length of Stay Prediction in the Intensive Care …
  ☆78Updated last month
• whaleloops / TransformEHR
  ☆37Updated last year
• vanderschaarlab / temporai
  TemporAI: ML-centric Toolkit for Medical Time Series
  ☆117Updated last year
• mmcdermott / EventStreamGPT
  Dataset and modelling infrastructure for modelling "event streams": sequences of continuous time, multivariate events with complex intern…
  ☆112Updated 2 months ago
• XZhang97666 / MultimodalMIMIC
  ☆33Updated 2 years ago
• yy6linda / synthetic-ehr-benchmarking
  ☆31Updated 2 years ago
• ZhiGroup / CovRNN
  ☆12Updated 3 years ago
• sajaddarabi / TAPER-EHR
  Patient Code & Text Representation Learning
  ☆20Updated 2 years ago
• BorgwardtLab / mgp-tcn
  Sepsis Prediction on MIMIC
  ☆71Updated 3 years ago
• AmsterdamUMC / AmsterdamUMCdb
  AmsterdamUMCdb - Freely Accessible ICU database. Please access our Open Access manuscript at https://doi.org/10.1097/CCM.0000000000004916
  ☆177Updated 4 months ago
• Oufattole / meds-torch
  ☆21Updated this week
• mmcdermott / MEDS_transforms
  A simple set of MEDS polars-based ETL and transformation functions
  ☆31Updated 3 weeks ago
• Medical-Event-Data-Standard / MEDS-DEV
  The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health
  ☆26Updated this week