☆51Oct 25, 2023Updated 2 years ago
Alternatives and similar repositories for TransformEHR
Users that are interested in TransformEHR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- General Healthcare Predictive Framework☆24Dec 6, 2025Updated 7 months ago
- ☆94Mar 8, 2025Updated last year
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆227Jun 6, 2025Updated last year
- A toolkit for developing foundation models using Electronic Health Record (EHR) data.☆61Updated this week
- [Neural Networks'24] Multi-task Heterogeneous Graph Learning on Electronic Health Records☆21Sep 22, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- circEWS public code☆79Oct 30, 2024Updated last year
- ☆11Apr 8, 2022Updated 4 years ago
- Official implementation for paper "Predictive Modeling with Temporal Graphical Representation on Electronic Health Records"☆26Jun 5, 2024Updated 2 years ago
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆53Jan 11, 2024Updated 2 years ago
- code companion to manuscript☆14Feb 21, 2024Updated 2 years ago
- A Multimodal Transformer: Fusing Clinical Notes With Structured EHR Data for Interpretable In-Hospital Mortality Prediction☆37Jul 26, 2022Updated 3 years ago
- 🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…☆103Jun 8, 2026Updated last month
- A customizable pipeline for multimodal data extraction from MIMIC-IV!☆345Jul 6, 2026Updated 2 weeks ago
- [ML4H 2022] This is the code for our paper `Counterfactual and Factual Reasoning over Hypergraphs for Interpretable Clinical Predictions …☆27Feb 6, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆128Jun 12, 2026Updated last month
- [ACL 2024] This is the code for our paper ”RAM-EHR: Retrieval Augmentation Meets Clinical Predictions on Electronic Health Records“.☆42Sep 19, 2024Updated last year
- Official implementation of TACCO (Task-guided Co-clustering).☆16Aug 31, 2024Updated last year
- Codes for AAAI 2022 paper: Context-aware Health Event Prediction via Transition Functions on Dynamic Disease Graphs☆26Dec 5, 2021Updated 4 years ago
- Code for BEHRT: Transformer for Electronic Health Records☆129Apr 6, 2023Updated 3 years ago
- Official implementation of SMART: Towards Pre-trained Missing-Aware Model for Patient Health Status Prediction☆19Mar 19, 2025Updated last year
- GNN enabled surrogate modeling for chemical docking☆16Nov 3, 2022Updated 3 years ago
- source codes based on PyTorch to analyze EHR☆150Jan 22, 2024Updated 2 years ago
- Repo of pharmacophoric constrained heterogeneous-graph-transformer☆17Mar 30, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆100Mar 19, 2026Updated 4 months ago
- AAAI-23 paper: Context-aware Safe Medication Recommendations with Molecular Graph and DDI Graph Embedding☆19Nov 11, 2025Updated 8 months ago
- Introduction The context is the 2016 public use NH medical claims files obtained from NH CHIS (Comprehensive Health Care Information Syst…☆26Jan 17, 2019Updated 7 years ago
- Code repository for the paper : Causal thinking for decision making on Electronic Health Records: why and how☆25Nov 10, 2023Updated 2 years ago
- [npj Digital Medicine 2025] Multiple Embedding Model for EHR (MEME) used for strong prediction on Emergency Department tasks☆21Jul 8, 2025Updated last year
- [ACL 2025] Adaptive Retrieval without Self-Knowledge? Bringing Uncertainty Back Home☆20May 17, 2025Updated last year
- Fall Detection in EHR using Word Embeddings and Deep Learning☆16Nov 23, 2020Updated 5 years ago
- Official implementation of Neuronal Time-Invariant Representations (NeuPRINT), NeurIPS 2023☆10Mar 10, 2026Updated 4 months ago
- [ICML'25] MMedPO: Aligning Medical Vision-Language Models with Clinical-Aware Multimodal Preference Optimization☆74Jun 5, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆14Jun 1, 2023Updated 3 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Jun 28, 2022Updated 4 years ago
- Scripts for reading, extracting, and organizing data from either HTML or PDF documents and prepare them to be converted into embeddings f…☆13Aug 26, 2024Updated last year
- Knowledge-Based System'25☆11Dec 15, 2024Updated last year
- Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset☆27Jul 31, 2023Updated 2 years ago
- ☆11Oct 2, 2024Updated last year
- Code for TKDE paper: Patient Health Representation Learning via Correlational Sparse Prior of Medical Features.☆11Jan 5, 2023Updated 3 years ago