whaleloops / TransformEHRLinks
☆39Updated last year
Alternatives and similar repositories for TransformEHR
Users that are interested in TransformEHR are comparing it to the libraries listed below
Sorting:
- ☆34Updated 2 years ago
- Training HuggingFace models on EHR data☆26Updated 3 weeks ago
- ☆72Updated 3 months ago
- A Multimodal Transformer: Fusing Clinical Notes With Structured EHR Data for Interpretable In-Hospital Mortality Prediction☆33Updated 2 years ago
- Code repository for the framework to engage in clinical decision making task using the MIMIC-CDM dataset.☆38Updated 4 months ago
- Code repository to create the MIMIC-CDM Dataset.☆34Updated 4 months ago
- This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…☆123Updated 2 years ago
- ☆26Updated 4 months ago
- [ACL 2024] This is the code for our paper ”RAM-EHR: Retrieval Augmentation Meets Clinical Predictions on Electronic Health Records“.☆37Updated 9 months ago
- 🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…☆72Updated this week
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆35Updated last month
- Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.☆83Updated 2 years ago
- Repository for the HiRID ICU Benchmark (HiB) project☆57Updated last year
- Experiments applying FIDDLE on MIMIC-III and eICU. https://doi.org/10.1093/jamia/ocaa139☆24Updated 2 years ago
- source codes based on PyTorch to analyze EHR☆140Updated last year
- [Neural Networks'24] Multi-task Heterogeneous Graph Learning on Electronic Health Records☆11Updated 9 months ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆63Updated last week
- Code repository to analyse the performance and results of selected LLMs using the MIMIC CDM dataset.☆19Updated 4 months ago
- [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams☆33Updated 2 weeks ago
- COVID-19 EHR data analysis pipeline☆20Updated 5 months ago
- Repository for the paper 'MDS-ED: Multimodal Decision Support in the Emergency Department – a benchmark dataset based on MIMIC-IV'.☆19Updated last month
- Code repository for the paper : Causal thinking for decision making on Electronic Health Records: why and how☆18Updated last year
- ☆21Updated 2 weeks ago
- ☆24Updated 5 years ago
- Dataset for Checking Consistency between Unstructured Notes and Structured Tables in Electronic Health Records☆22Updated 10 months ago
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆144Updated this week
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆62Updated last month
- circEWS public code☆69Updated 7 months ago
- [NeurIPS 2024 D&B] Official code for "EHRNoteQA: An LLM Benchmark for Real-World Clinical Practice Using Discharge Summaries"☆32Updated 5 months ago
- Official implementation for paper "Predictive Modeling with Temporal Graphical Representation on Electronic Health Records"☆20Updated last year