on1262 / sepsisdataprocessingLinks
data processing code for MIMIC-IV 2.2
☆12Updated last year
Alternatives and similar repositories for sepsisdataprocessing
Users that are interested in sepsisdataprocessing are comparing it to the libraries listed below
Sorting:
- Repository for the HiRID ICU Benchmark (HiB) project☆58Updated 2 years ago
- circEWS public code☆71Updated 10 months ago
- A customizable pipeline for data extraction from MIMIC-IV.☆260Updated last month
- Sepsis Prediction on MIMIC☆71Updated 3 years ago
- OMOP standardization pipeline for ICU databases☆44Updated 6 months ago
- Experiments applying FIDDLE on MIMIC-III and eICU. https://doi.org/10.1093/jamia/ocaa139☆25Updated 3 years ago
- VentAI source code☆28Updated last year
- ☆33Updated 3 years ago
- Code for BEHRT: Transformer for Electronic Health Records☆114Updated 2 years ago
- ☆26Updated 5 years ago
- 🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…☆75Updated 2 weeks ago
- Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.☆84Updated 2 years ago
- A probabilistic model to cluster survival data in a variational deep clustering setting☆30Updated 3 years ago
- SurvTRACE: Transformers for Survival Analysis with Competing Events☆57Updated last year
- Dynamic-DeepHit: A Deep Learning Approach for Dynamic Survival Analysis With Competing Risks Based on Longitudinal Data☆81Updated 5 years ago
- Code for the paper "Deep Cox Mixtures for Survival Regression", Machine Learning for Healthcare Conference 2021☆29Updated 2 years ago
- source codes based on PyTorch to analyze EHR☆147Updated last year
- This repository contains the code used for Temporal Pointwise Convolutional Networks for Length of Stay Prediction in the Intensive Care …☆80Updated 5 months ago
- ☆79Updated last year
- Early prediction of sepsis with gradient boosting (XGBoost) and deep learning (LSTM and GRU) using MIMIC-III data.☆15Updated 3 years ago
- Code for paper "Estimating Trustworthy Treatment Effects for Antibiotic Stewardship in Sepsis"☆18Updated 2 years ago
- [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams☆36Updated 3 months ago
- Sepsis Prediction using Clinical Data (PhysioNet Computing in Cardiology Challenge 2019)☆29Updated 4 years ago
- TemporAI: ML-centric Toolkit for Medical Time Series☆119Updated last year
- Early Prediction of Sepsis from Clinical Time Series Data☆36Updated 5 years ago
- Tutorials on using the MIMIC Waveform Database☆32Updated last year
- ☆76Updated 6 months ago
- ☆23Updated 4 years ago
- Source code for a comprehensive analysis of MTL over EHR timeseries data.☆37Updated 2 years ago
- Dynamic Deep Hit - Pytorch implementation☆27Updated 3 months ago