Scripts to do interesting things with phylogenetic trees and spatial data
☆15May 23, 2018Updated 7 years ago
Alternatives and similar repositories for phylospatial
Users that are interested in phylospatial are comparing it to the libraries listed below
Sorting:
- Querying database aggregators and citing primary sources of resulting occurrence records.☆24Sep 29, 2025Updated 5 months ago
- Fast, accurate zonal statistics for "big" categorical and continuous data☆31Dec 6, 2024Updated last year
- R package for downloading functional traits data for plant species☆23Sep 22, 2024Updated last year
- A versioned and dynamically updating taxonomic lookup table for land plants☆33Feb 20, 2019Updated 7 years ago
- rtrees: an R package to assemble phylogenetic trees from mega-trees☆36Aug 9, 2025Updated 6 months ago
- Materials for the Workshop "Big Data Ecology"☆18Jul 12, 2021Updated 4 years ago
- Automatically download and clean global protected area data☆11Jan 25, 2017Updated 9 years ago
- I do not have time to maintain this anymore! It remains as a sandbox/playground :)☆11May 13, 2024Updated last year
- This repository contains the R codes and relevant data for performing the S.PhyloMaker function.☆15Sep 22, 2020Updated 5 years ago
- R package to streamline functional biogeography workflows and provide publication-ready plots☆12Jul 11, 2025Updated 7 months ago
- R package to simplify workflows of D6 research projects. The package provides utilities to set up a standardized folder structure and ver…☆10Jun 20, 2024Updated last year
- Tools for data handling and analysis in macroecology☆29Feb 11, 2026Updated 2 weeks ago
- Phylogenetic ANalyses of DiversificAtion☆27Jan 27, 2026Updated last month
- Large-scale taxonomic harmonization of plant names by fuzzy matching and synonymy resolution against the Leipzig Plant List as taxonomic …☆14Nov 7, 2022Updated 3 years ago
- starmie: plotting and inference for population structure models☆15Sep 20, 2018Updated 7 years ago
- Tools for teaching and doing data science without an internet connection☆11Feb 13, 2026Updated 2 weeks ago
- R package to compute Climdex indices on gridded NetCDF files☆15Jul 30, 2020Updated 5 years ago
- Occupancy modelling with generalized additive models in Template Model Builder.☆12Jan 11, 2023Updated 3 years ago
- Tools for ecological niche evolution assessment considering uncertainty☆15Mar 10, 2023Updated 2 years ago
- An R package to repair broken GIS polygons using the prepair (https://github.com/tudelft3d/prepair) Cpp library - mirror to the Gitlab re…☆12Nov 9, 2022Updated 3 years ago
- Functions for phylogenetic analyses☆36Nov 10, 2025Updated 3 months ago
- This R package makes phylogenetic hypotheses for a user-specified list of species at a faster speed than S.PhyloMaker☆34Jul 9, 2021Updated 4 years ago
- Systematic conservation prioritization in R☆136Updated this week
- ☆14Jan 11, 2024Updated 2 years ago
- A program for estimating extinction probability and date for a given set of species, based on IUCN threat assessments☆15Jun 21, 2023Updated 2 years ago
- Parsers (rule-based) for information extraction of traits from plant treatments☆14Aug 15, 2025Updated 6 months ago
- This package (an updated version of 'V.PhyloMaker') can generate a phylogenetic tree for vascular plants based on three different botanic…☆23Nov 17, 2022Updated 3 years ago
- Model and predicts species accounting for their known trophic interaction network☆18Jun 24, 2024Updated last year
- Species Presence/Absence R Trends Analyses☆22Jun 18, 2024Updated last year
- Self-Updating Platform for the Estimation of Rates of Speciation, Migration And Relationships of Taxa☆17Jun 24, 2020Updated 5 years ago
- Slides of my introduction to the Tidyverse☆16Oct 22, 2020Updated 5 years ago
- Sampbias is a method and tool to 1) visualize the distribution of occurrence records and species in any user-provided dataset, 2) quantif…☆36May 29, 2024Updated last year
- R Package to Access Kew Data APIs☆21Jun 30, 2022Updated 3 years ago
- The Leipzig Catalogue of Vascular Plants☆17Nov 7, 2022Updated 3 years ago
- HTML Image Gallery in R with responsive layouts and lightbox☆20Dec 19, 2025Updated 2 months ago
- Codes for Zurell et al. (2020) Testing species assemblage predictions from stacked and joint species distribution models. Journal of Biog…☆17Sep 9, 2020Updated 5 years ago
- Versioned database that includes growth form information for the world's land plants, currently >140,000 species☆19Feb 17, 2019Updated 7 years ago
- Spatially Correlated, Approximate Modelling of Point patterns in R☆17Mar 13, 2024Updated last year
- Data Toolbox Training☆18Dec 17, 2021Updated 4 years ago