Alternatives and similar repositories for MEME

Users that are interested in MEME are comparing it to the libraries listed below

• som-shahlab / ehrshot-benchmark
  A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)
  ☆189Updated 2 months ago
• som-shahlab / femr
  FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…
  ☆155Updated 3 weeks ago
• ipolharvard / ethos-paper
  ☆76Updated 5 months ago
• AIM-Harvard / SDoH
  Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…
  ☆47Updated last year
• lrsoenksen / HAIM
  This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…
  ☆128Updated this week
• Medical-Event-Data-Standard / meds_etl
  A collection of ETLs from common data formats to Medical Event Data Standard
  ☆33Updated 3 weeks ago
• som-shahlab / hf_ehr
  Training HuggingFace models on EHR data
  ☆28Updated last month
• Jwoo5 / integrated-ehr-pipeline
  ☆14Updated last year
• ZhiGroup / Med-BERT
  Med-BERT, contextualized embedding model for structured EHR data
  ☆297Updated last year
• Medical-Event-Data-Standard / meds
  Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data
  ☆72Updated 3 weeks ago
• starmpcc / REMed
  REMed: Retrieval-Enhanced Medical prediction model
  ☆19Updated 7 months ago
• CogStack / Foresight
  Deep Generative Modelling of Patient Timelines using Electronic Health Records
  ☆63Updated 2 months ago
• MadhumitaSushil / OncLLMExtraction
  Expert-Curated Oncology Reports to Advance Language Model Inference
  ☆29Updated last year
• mmcdermott / MEDS_transforms
  A simple set of MEDS polars-based ETL and transformation functions
  ☆33Updated last month
• paulhager / MIMIC-Clinical-Decision-Making-Framework
  Code repository for the framework to engage in clinical decision making task using the MIMIC-CDM dataset.
  ☆43Updated 6 months ago
• whaleloops / TransformEHR
  ☆43Updated last year
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆96Updated 2 months ago
• rvandewater / YAIB
  🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…
  ☆74Updated last week
• nyuolab / NYUTron
  public code repository for paper "Health system scale language models are general purpose clinical prediction engines"
  ☆116Updated 2 years ago
• ZhiGroup / pytorch_ehr
  source codes based on PyTorch to analyze EHR
  ☆145Updated last year
• hiesingerlab / almanac-retrieval
  Almanac: Retrieval-Augmented Language Models for Clinical Medicine
  ☆36Updated last year
• yy6linda / synthetic-ehr-benchmarking
  ☆32Updated 2 years ago
• som-shahlab / motor_tutorial
  Tutorial repository for the official MOTOR release
  ☆14Updated 6 months ago
• justin13601 / ACES
  [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams
  ☆35Updated 2 months ago
• thomasnguyen92 / MIMIC-IV-ICD-data-processing
  ☆40Updated 2 years ago
• hoon9405 / GenHPF
  General Healthcare Predictive Framework
  ☆17Updated 5 months ago
• Medical-Event-Data-Standard / MEDS-DEV
  The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health
  ☆28Updated 3 months ago
• deepmedicine / BEHRT
  Code for BEHRT: Transformer for Electronic Health Records
  ☆112Updated 2 years ago
• starmpcc / Asclepius
  Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"
  ☆107Updated last year
• healthylaife / MIMIC-IV-Data-Pipeline
  A customizable pipeline for data extraction from MIMIC-IV.
  ☆255Updated last month