Simonlee711 / MEMELinks
[npj Digital Medicine 2025] Multiple Embedding Model for EHR (MEME) used for strong prediction on Emergency Department tasks
☆15Updated last month
Alternatives and similar repositories for MEME
Users that are interested in MEME are comparing it to the libraries listed below
Sorting:
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆45Updated last year
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆153Updated last week
- ☆73Updated 5 months ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆183Updated 2 months ago
- Training HuggingFace models on EHR data☆28Updated 3 weeks ago
- Med-BERT, contextualized embedding model for structured EHR data☆295Updated last year
- REMed: Retrieval-Enhanced Medical prediction model☆19Updated 7 months ago
- This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…☆128Updated 2 years ago
- ☆14Updated last year
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆68Updated this week
- Code repository for the framework to engage in clinical decision making task using the MIMIC-CDM dataset.☆38Updated 6 months ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆63Updated last month
- Expert-Curated Oncology Reports to Advance Language Model Inference☆29Updated last year
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆96Updated last month
- public code repository for paper "Health system scale language models are general purpose clinical prediction engines"☆113Updated 2 years ago
- ☆40Updated 2 years ago
- 🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…☆74Updated last week
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆106Updated 11 months ago
- Code for BEHRT: Transformer for Electronic Health Records☆111Updated 2 years ago
- A collection of ETLs from common data formats to Medical Event Data Standard☆33Updated last week
- A simple set of MEDS polars-based ETL and transformation functions☆33Updated last month
- ☆32Updated 2 years ago
- Clinical text summarization by adapting large language models☆148Updated last year
- ☆89Updated 11 months ago
- A customizable pipeline for data extraction from MIMIC-IV.☆248Updated last week
- ☆42Updated last year
- source codes based on PyTorch to analyze EHR☆144Updated last year
- The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health☆27Updated 2 months ago
- General Healthcare Predictive Framework☆17Updated 4 months ago
- [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams☆34Updated 2 months ago