Alternatives and similar repositories for upsetty

Users that are interested in upsetty are comparing it to the libraries listed below

• panoptes-organization / panoptes
  Monitor computational workflows in real time
  ☆74Updated last year
• abdenlab / oxbow
  Oxbow makes genomic data ready for high-performance analytics.
  ☆114Updated last month
• biodatageeks / polars-bio
  Blazing-Fast Bioinformatic Operations on Python DataFrames
  ☆69Updated this week
• nextflow-io / nf-sqldb
  SQL support plugin for Nextflow
  ☆30Updated last month
• gosling-lang / gos
  A declarative interactive genomics visualization library for Python.
  ☆228Updated last week
• wheretrue / biobear
  Work with bioinformatic files using Arrow, Polars, and/or DuckDB
  ☆186Updated 4 months ago
• grst / containerize-conda
  Turn an existing conda environment into a Singularity container
  ☆80Updated 2 years ago
• goodwright / nextflow.py
  Python wrapper around Nextflow.
  ☆59Updated 2 weeks ago
• open2c / bioframe
  Genomic interval operations on Pandas DataFrames
  ☆184Updated this week
• manzt / pygv
  a minimal, scriptable genome browser for python
  ☆51Updated 7 months ago
• higlass / higlass-python
  Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer
  ☆59Updated this week
• omgenomics / bio-data-zoo
  Example genomics data for tool developers
  ☆114Updated last year
• sgkit-dev / sgkit
  Scalable genetics toolkit
  ☆259Updated 3 weeks ago
• jnothman / UpSetPlot
  Draw UpSet plots with Matplotlib
  ☆356Updated last year
• Zsailer / phylopandas
  Pandas DataFrames for phylogenetics
  ☆73Updated 4 years ago
• snakemake / snakefmt
  The uncompromising Snakemake code formatter
  ☆173Updated 3 months ago
• koonimaru / omniplot
  Statistical analysis, clustering and visualinzing scientific data with hassle free
  ☆25Updated 2 weeks ago
• endrebak / poranges
  pyranges/bioframe for polars
  ☆18Updated 2 years ago
• kpj / rwrap
  Seamlessly integrate R packages into Python.
  ☆21Updated 2 years ago
• arvkevi / ezancestry
  Easy genetic ancestry predictions in Python
  ☆65Updated last month
• grst / nxfvars
  Access nextflow variables from python scripts or notebooks
  ☆21Updated 4 years ago
• gosling-lang / gosling.js
  Grammar of Scalable Linked Interactive Nucleotide Graphics
  ☆177Updated last week
• foerstner-lab / gffpandas
  Parse GFF3 into Pandas dataframes
  ☆28Updated last year
• snakemake-workflows / cookiecutter-snakemake-workflow
  A cookiecutter template for Snakemake workflows
  ☆59Updated 3 years ago
• seqeralabs / seqerakit
  Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)
  ☆30Updated last week
• schlegelp / catheat
  Plot categorical heatmaps with seaborn
  ☆18Updated 2 years ago
• vsbuffalo / scidataflow
  Command line scientific data management tool
  ☆223Updated 8 months ago
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated last year
• snakemake / snakemake-executor-plugin-slurm
  A Snakemake executor plugin for submitting jobs to a SLURM cluster
  ☆39Updated this week
• snakemake / snakemake-github-action
  A Github action for running a Snakemake workflow
  ☆59Updated last month