Epidemiology modelling framework for the Thanzi la Onse project
☆35Aug 7, 2026Updated this week
Alternatives and similar repositories for TLOmodel
Users that are interested in TLOmodel are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Templates for commonly used GitHub actions steps☆13Dec 13, 2024Updated last year
- R package for easier interactions with the Go.Data API☆13May 15, 2023Updated 3 years ago
- Simulate infectious disease transmission with contact tracing☆18Jun 29, 2026Updated last month
- A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.☆21Sep 1, 2025Updated 11 months ago
- HMC and other derivative-based MCMC sampling algorithms for the nimble package☆13Jul 20, 2026Updated 3 weeks ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Python package template for new research software projects☆62Updated this week
- R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series☆15Jan 1, 2026Updated 7 months ago
- ☆17Mar 30, 2026Updated 4 months ago
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 10 months ago
- R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility☆15Mar 26, 2026Updated 4 months ago
- TEMPLATE for R Markdown lessons☆12Updated this week
- [On-CRAN] Systematically deploy files across multiple GitHub repositories☆18Aug 22, 2025Updated 11 months ago
- Repository to the R package nowcaster, nowcasting with INLA☆24Jul 24, 2026Updated 2 weeks ago
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Aug 31, 2022Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Estimate epidemiological delay distributions with brms☆16Jun 22, 2026Updated last month
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Dec 18, 2022Updated 3 years ago
- My notes and work for the Bayesian Data Analysis course taught by Aki Vehtari.☆18Oct 29, 2022Updated 3 years ago
- Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Il…☆17Oct 31, 2024Updated last year
- A modular Bayesian framework for real-time infectious disease surveillance. Provides tools for nowcasting, reproduction number estimation…☆67Aug 3, 2026Updated last week
- CRAN Task View: Epidemiology☆23Jun 6, 2026Updated 2 months ago
- Color Palettes Inspired by Works Mexican Muralists☆28Feb 24, 2023Updated 3 years ago
- Gaussian processes with spherical harmonic features in JAX☆16Aug 24, 2025Updated 11 months ago
- ☆11Mar 11, 2026Updated 4 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- An R package for the analysis of infectious disease transmission data☆10Nov 8, 2021Updated 4 years ago
- A comprehensive list of auxiliary files used by LaTeX☆16Nov 16, 2015Updated 10 years ago
- R Package for individual based epidemiological models☆35Jun 8, 2026Updated 2 months ago
- Code accompanying the paper 'Manifold MCMC methods for Bayesian inference in a wide class of diffusion models'☆10May 28, 2025Updated last year
- Automatically update SUMMARY.md of a GitBook repo，default Based on the markdown title, not the article name，But if without a title, artic…☆11Jul 6, 2022Updated 4 years ago
- 🌎 Regional-to-global coupled ocean and sea ice simulations based on Oceananigans☆66Jul 28, 2026Updated last week
- An R package for tidyverse-friendly causal inference☆10Aug 2, 2019Updated 7 years ago
- rmarkdown-xaringan-slides☆11Jun 2, 2023Updated 3 years ago
- ☆31Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Course on nowcasting and forecasting of infectious disease dynamics☆24Aug 1, 2026Updated last week
- Projections of future incidence☆14Dec 6, 2024Updated last year
- ☆10Jul 21, 2024Updated 2 years ago
- Code for the talk "Approximate Bayesian inference for latent Gaussian models in Stan"☆13Updated this week
- Steve's {ggplot2} themes and related theme elements☆12Apr 27, 2023Updated 3 years ago
- Introduction to Econometrics at the University of Oregon (EC421) during Winter quarter, 2022. Taught by Ed Rubin.☆13Mar 5, 2022Updated 4 years ago
- NIU website on common software problems and their troubleshooting☆10Jul 14, 2026Updated 3 weeks ago