DeepRank / deeprankLinks
This repository has been integrated in https://github.com/DeepRank/deeprank2
☆145Updated last year
Alternatives and similar repositories for deeprank
Users that are interested in deeprank are comparing it to the libraries listed below
Sorting:
- Repository for publicly available deep learning models developed in Rosetta community☆119Updated 4 years ago
- open source repository☆141Updated last year
- ThermoNet is a computational method for quantitative prediction of the impact of single-point mutations on protein thermodynamic stabilit…☆118Updated last year
- Generative Language Modeling for Antibody Design☆165Updated last year
- A package to predict protein inter-residue geometries from sequence data☆217Updated 4 years ago
- ☆225Updated 2 years ago
- ☆133Updated 3 months ago
- AbLang: A language model for antibodies☆148Updated 2 years ago
- Note that current version does not include search of very large metagenome data. For some proteins, metagenome data is important. We will…☆98Updated 3 years ago
- GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!☆57Updated 2 years ago
- ☆112Updated 2 years ago
- Code for our paper "Protein sequence design with a learned potential"☆80Updated 2 years ago
- trRosetta for protein design☆182Updated 4 years ago
- Paratope Prediction using Deep Learning☆61Updated 2 years ago
- ☆126Updated last year
- Deep residual neural network for protein contact/distance prediction developed by Xu group☆79Updated 5 years ago
- MolMapNet: An Efficient ConvNet with Knowledge-based Molecular Represenations for Molecular Deep Learning☆142Updated 5 months ago
- Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies☆89Updated 2 years ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆129Updated 3 years ago
- A geometric deep learning framework (Geometric Transformers) for predicting protein interface contacts. (ICLR 2022)☆64Updated 3 years ago
- Protein-compound affinity prediction through unified RNN-CNN☆149Updated last year
- Protein-ligand structure prediction☆228Updated 2 months ago
- DeeplyTough: Learning Structural Comparison of Protein Binding Sites☆166Updated 2 years ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆107Updated last year
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆164Updated 2 years ago
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆105Updated 3 weeks ago
- ☆130Updated 3 years ago
- EquiDock: geometric deep learning for fast rigid 3D protein-protein docking☆250Updated 2 years ago
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆90Updated 4 years ago
- Predict the binding affinity of protein-protein complexes from structural data☆149Updated last week