covid-19-Re / shiny-dailyRe
R app for daily Covid-19 Re estimates
☆19Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for shiny-dailyRe
- ☆9Updated 2 years ago
- Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia☆13Updated last year
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated last year
- Excess deaths due to COVID-19 pandemic in 2020☆10Updated 2 years ago
- Compute and visualise incidence (reworking of the original incidence package)☆17Updated last month
- modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission☆18Updated 11 months ago
- Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH☆17Updated 2 years ago
- ☆26Updated 3 years ago
- Code for reconstructing influenza dynamics from surveillance data using evidence synthesis techniques☆19Updated 2 years ago
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Updated last year
- R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic☆10Updated 2 months ago
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆16Updated last year
- Video lectures, slides and code for "The Mathematics and Statistics of Infectious Disease Outbreaks" course at Stockholm University☆33Updated 3 years ago
- Analysis of excess mortality in Italy during the COVID-19 pandemic☆15Updated 4 months ago
- Implication of overdispersed transmission of COVID-19 on the effectiveness of contact tracing☆8Updated 4 years ago
- Infectious disease model library and utilities☆15Updated 2 years ago
- Analysing epidemic trends using AutoML approaches.☆18Updated 3 years ago
- SEIR+ model☆20Updated 2 months ago
- Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States☆27Updated last month
- R package for estimating excess deaths from daily count data☆20Updated 3 months ago
- ☆23Updated 3 years ago
- An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…☆37Updated last year
- CRAN Task View: Epidemiology☆21Updated this week
- R package for easier interactions with the Go.Data API☆12Updated last year
- Data from Google's Covid-19 Mobility Report☆48Updated 4 years ago
- Repository for useR! 2021 TileDB Tutorial Helper Package☆13Updated 3 years ago
- FluSight Forecast Submissions☆18Updated 6 months ago
- R package to fit statistical models to repeated categorical rating data using Stan☆18Updated last year
- R Package for individual based epidemiological models☆30Updated 2 months ago
- Covid-19 epidemiology - data and analysis☆11Updated 11 months ago