colbyford / pemfauxlizumabLinks
Pembrolizumab-like Antibody Hallucination using AlphaFold2
☆16Updated last year
Alternatives and similar repositories for pemfauxlizumab
Users that are interested in pemfauxlizumab are comparing it to the libraries listed below
Sorting:
- Implementation of Nvidia's NeuralPlexer, for end-to-end differentiable design of functional small-molecules and ligand-binding proteins, …☆51Updated last year
- RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Ma…☆97Updated 2 years ago
- A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only. …☆22Updated 2 years ago
- Replication attempt for the Protein Folding Model described in https://www.biorxiv.org/content/10.1101/2021.08.02.454840v1☆37Updated 3 years ago
- ☆30Updated 2 years ago
- Implementation and replication of ProGen, Language Modeling for Protein Generation, in Jax☆113Updated 3 years ago
- My own attempt at a long context genomics model, leveraging recent advances in long context attention modeling (Flash Attention + other h…☆53Updated last year
- Implementation of the Pairformer model used in AlphaFold 3☆12Updated this week
- Implementation of Tranception, an attention network, paired with retrieval, that is SOTA for protein fitness prediction☆32Updated 3 years ago
- Open source code for AlphaFold to extract protein embeddings☆26Updated 3 years ago
- Implementation of trRosetta and trDesign for Pytorch, made into a convenient package, for protein structure prediction and design☆82Updated 3 years ago
- ☆72Updated last year
- Supporting code for the paper "Discovery of a structural class of antibiotics with explainable deep learning"☆96Updated last year
- This repository contains code for reproducing results in our paper Interpreting Potts and Transformer Protein Models Through the Lens of …☆58Updated 2 years ago
- A Modular Architecture for Deep Learning Systems☆41Updated last month
- Protein language model customized for antibodies☆137Updated 3 months ago
- Ledidi turns any machine learning model into a biological sequence editor, allowing you to design sequences with desired properties.☆83Updated 2 weeks ago
- Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch☆160Updated 2 years ago
- pytorch implementation of trDesign☆45Updated 4 years ago
- Implementation of Denoising Diffusion for protein design, but using the new Equiformer (successor to SE3 Transformers) with some addition…☆57Updated 2 years ago
- ProtMamba: a homology-aware but alignment-free protein state space model☆70Updated 3 weeks ago
- The gzip classification method implemented for molecule classification.☆55Updated 9 months ago
- Comparison of active site and full kinase sequences for drug-target affinity prediction and molecular generation. Full paper: https://pub…☆36Updated 2 years ago
- ☆26Updated last year
- ☆31Updated 2 months ago
- ML-guided enzyme engineering☆64Updated 2 weeks ago
- Discovering Interpretable Features in Protein Language Models via Sparse Autoencoders☆181Updated 4 months ago
- ☆34Updated last month
- Easy & Pretrained SOTA Deep Learning for RNA strings☆12Updated 3 years ago
- ☆12Updated 7 months ago