colbyford / pemfauxlizumab
Pembrolizumab-like Antibody Hallucination using AlphaFold2
☆16Updated last year
Alternatives and similar repositories for pemfauxlizumab:
Users that are interested in pemfauxlizumab are comparing it to the libraries listed below
- A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only. …☆22Updated last year
- RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Ma…☆96Updated 2 years ago
- ML-guided enzyme engineering☆60Updated last week
- Implementation and replication of ProGen, Language Modeling for Protein Generation, in Jax☆112Updated 3 years ago
- Replication attempt for the Protein Folding Model described in https://www.biorxiv.org/content/10.1101/2021.08.02.454840v1☆37Updated 2 years ago
- Open source code for AlphaFold to extract protein embeddings☆26Updated 3 years ago
- pytorch implementation of trDesign☆45Updated 4 years ago
- ☆26Updated 11 months ago
- Implementation of the Pairformer model used in AlphaFold 3☆12Updated this week
- Implementation of Nvidia's NeuralPlexer, for end-to-end differentiable design of functional small-molecules and ligand-binding proteins, …☆50Updated last year
- ProtMamba: a homology-aware but alignment-free protein state space model☆62Updated last month
- Created a RNN with LSTM cells to learn patterns from SMILES Strings, and use them to generate new molecular structures.☆18Updated 6 years ago
- ☆116Updated 8 months ago
- Implementation of trRosetta and trDesign for Pytorch, made into a convenient package, for protein structure prediction and design☆81Updated 3 years ago
- Supporting code for the paper "Discovery of a structural class of antibiotics with explainable deep learning"☆94Updated last year
- Automancer is a software application that enables researchers to design, automate, and manage their experiments.☆20Updated last year
- ☆20Updated 9 months ago
- A repository with exploration into using transformers to predict DNA ↔ transcription factor binding☆84Updated 2 years ago
- Protein language model customized for antibodies☆131Updated last month
- Repository of Jupyter Notebooks on Colab, Binder and Huggingface for Bio, Chemistry and Physics☆14Updated last year
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆56Updated 6 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆69Updated 3 months ago
- ☆34Updated 3 years ago
- ☆34Updated 4 years ago
- ☆30Updated 2 years ago
- LoRA for protein language models☆36Updated last year
- Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…☆61Updated 3 months ago
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆35Updated 3 years ago
- Your favourite classical machine learning algos on the GPU/TPU☆20Updated 3 months ago
- Predict the structure of immune receptor proteins☆48Updated 5 months ago