Alternatives and similar repositories for myriad:

Users that are interested in myriad are comparing it to the libraries listed below

• johanneskoester / alpaca
  ALPACA is a caller for genomic variants (single nucleotide and small indels) from next-generation sequencing data that uses a novel algeb…
  ☆23Updated 5 months ago
• IQTLabs / freqgen
  🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies
  ☆16Updated 2 years ago
• mattmight / calculendar
  A command line tool that uses a Boolean calculus of calendars for computing availability (currently supports Google Calendar API)
  ☆25Updated 3 years ago
• pcingola / BigDataScript
  BigDataScript: Scirpting language for big data
  ☆92Updated 4 years ago
• JohnLonginotto / log.bio
  Log command line events to a graph database :)
  ☆13Updated 9 years ago
• lgautier / mashing-pumpkins
  Minhash and maxhash library in Python, combining flexibility, expressivity, and performance.
  ☆21Updated 4 months ago
• wormtable / wormtable
  Write-once-read-many table for large datasets.
  ☆27Updated last year
• brentp / python-giggle
  python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.
  ☆16Updated 7 years ago
• luizirber / 2018-python-rust
  This work presents a way to write extensions in Rust and use them in Python, using sourmash as an example.
  ☆20Updated 6 years ago
• dnbaker / bonsai
  Bonsai: Fast, flexible taxonomic analysis and classification
  ☆70Updated last year
• IQTLabs / squiggle
  📈 DNA Sequence Visualization for Humans
  ☆40Updated 3 years ago
• kylessmith / ailist
  Augmented Interval Tree implemented in Cython/C
  ☆20Updated 3 months ago
• jmschrei / PyPore
  Tools used to analyze data from nanopore-based experiments.
  ☆30Updated 10 years ago
• vgteam / xg-old
  succinct labeled graphs with collections and paths
  ☆15Updated 6 years ago
• brentp / toolshed
  python stuff I use
  ☆19Updated 5 years ago
• common-workflow-lab / python-cwlgen
  Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement
  ☆29Updated 4 years ago
• uio-cels / genomicgraphcoords
  Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes
  ☆11Updated 7 years ago
• pygridtools / drmaa-python
  Python wrapper around the C DRMAA library.
  ☆108Updated 6 years ago
• johandahlberg / piper
  A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…
  ☆21Updated 8 years ago
• lifeomic / spark-vcf
  Spark VCF data source implementation for Dataframes
  ☆14Updated 2 years ago
• PMBio / warpedLMM
  ☆21Updated 10 years ago
• cgat-developers / ruffus
  CGAT-ruffus is a lightweight python module for running computational pipelines
  ☆174Updated 3 years ago
• BD2KGenomics / cgcloud
  Image and VM management for Jenkins, Spark and Mesos clusters in EC2
  ☆22Updated 4 years ago
• vcflib / tabixpp
  C++ wrapper to tabix indexer
  ☆17Updated last year
• dnanexus / dxfuse
  FUSE filesystem for the DNAnexus storage system
  ☆14Updated this week
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated 7 months ago
• brentp / pyfasta
  fast, memory-efficient, pythonic (and command-line) access to fasta sequence files
  ☆87Updated 7 years ago
• pycompression / xopen
  Open compressed files in Python
  ☆73Updated 3 weeks ago
• NLeSC / scriptcwl
  Create cwl workflows by writing a simple Python script
  ☆40Updated 4 years ago
• vidboda / MobiDetails
  WebApp for DNA variants interpretation
  ☆13Updated last week