davidcampos / covid19-corpusLinks
COVID-19 corpus with annotated biomedical entities.
☆11Updated 4 years ago
Alternatives and similar repositories for covid19-corpus
Users that are interested in covid19-corpus are comparing it to the libraries listed below
Sorting:
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 5 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towa…☆15Updated 6 years ago
- ☆22Updated 5 years ago
- Named Entity Recognition for biomedical entities☆48Updated 2 years ago
- Abbreviation definition dection library trained on PubMed abstracts☆49Updated 5 years ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- AGATHA: Automatic Graph-mining And Transformer based Hypothesis generation Approach☆59Updated 5 years ago
- Extracting scientific claims from biomedical abstracts (powered by AllenNLP)☆144Updated 4 years ago
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- Tools for working with the S800 corpus☆11Updated 5 years ago
- A python implementation of the Ensemble Biclustering for Classification (EBC) algorithm. EBC is a co-clustering algorithm that allows you…☆19Updated 8 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆27Updated last year
- Table compiling the list of biomedically-related corpora available for named entity recognition (and some also suitable for association d…☆18Updated 7 years ago
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).☆157Updated 2 years ago
- Medical Relations and Entities Extraction☆37Updated 3 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Updated 3 years ago
- Retrieve and process PubTator annotations☆44Updated 2 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 5 years ago
- Multimodal Transformers for biomedical text and Knowledge Graph data☆35Updated 2 years ago
- Predicting adverse drug reactions from a knowledge graph☆28Updated 4 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42Updated 5 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 4 years ago
- Python library for work with BioCreative files☆13Updated 7 years ago
- Flexible and powerful platform for biomedical information extraction from text☆39Updated 8 years ago
- A convolutional neural network model for relation extraction.☆12Updated 2 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 3 years ago
- Python library for converting between BioNLP formats☆22Updated 2 years ago
- ☆41Updated 5 years ago