BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.
☆32Dec 3, 2019Updated 6 years ago
Alternatives and similar repositories for bioelmo
Users that are interested in bioelmo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for AttentionMeSH☆17Oct 5, 2018Updated 7 years ago
- Implementation of the BLUE benchmark with Transformers.☆20Feb 16, 2024Updated 2 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆297Jan 12, 2022Updated 4 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆23May 11, 2020Updated 6 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Mar 26, 2026Updated 5 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Representation Learning of Entities and Documents from Knowledge Base Descriptions☆18Oct 6, 2018Updated 7 years ago
- Code for ACL '19 paper: Towards Improving Neural Named Entity Recognition with Gazetteers☆32Jul 2, 2021Updated 5 years ago
- ☆12Mar 20, 2020Updated 6 years ago
- ☆124May 2, 2018Updated 8 years ago
- ☆25Jan 15, 2024Updated 2 years ago
- Bioformer: an efficient BERT model for biomedical text mining☆57Feb 7, 2023Updated 3 years ago
- ☆10Jun 16, 2021Updated 5 years ago
- ☆23Sep 18, 2020Updated 5 years ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆66Aug 31, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Label shift estimation for transfer difficulty with Familiarity.☆10Feb 4, 2025Updated last year
- ☆10May 9, 2021Updated 5 years ago
- TensorFlow Implementation For [Neural Architecture for Named Entity Recognition](https://arxiv.org/abs/1603.01360)☆12Mar 4, 2018Updated 8 years ago
- a module to calculate the MeSH similarity☆27Dec 2, 2021Updated 4 years ago
- Zero-shot Entity Linking with blitz start in 3 minutes. Hard negative mining and encoder for all entities are also included in this imple…☆33Jun 12, 2023Updated 3 years ago
- K-RET: Knowledgeable Biomedical Relation Extraction System☆11Feb 22, 2025Updated last year
- ☆11Nov 21, 2024Updated last year
- Functions for handling RNA-seq files and formats as input and output for scrattch functions.☆11Aug 20, 2025Updated last year
- Few- and Zero-shot Multi-Label Learning for Structured Label Spaces☆21Aug 27, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆11Aug 3, 2026Updated 3 weeks ago
- 乾・岡崎研究室の言語処理100本ノックの解答例です.☆10Aug 18, 2016Updated 10 years ago
- Entity Linking & discovery solution. Agarwal et al., "Entity Linking via Explicit Mention-Mention Coreference Modeling", NAACL 2022.☆29Apr 11, 2024Updated 2 years ago
- This repository lists papers, codes, and datasets in Biomedical Text Summarisation based on PLM☆23Oct 4, 2022Updated 3 years ago
- This repository contains details and key points of research papers related to NLP and Deep Learning☆11Oct 25, 2023Updated 2 years ago
- LUNA: a Framework for Language Understanding and Naturalness Assessment.☆12Sep 9, 2023Updated 2 years ago
- Template and steps to build your personal blog using Jekyll and Minimal Mistake☆10Feb 24, 2020Updated 6 years ago
- conll-formatted-ontonotes-5.0 for chinese language☆11Jan 9, 2019Updated 7 years ago
- Keyword Extraction for Pathology Reports with BERT☆12Sep 2, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Nov 19, 2020Updated 5 years ago
- A small python package that allows the user to look up common medical abbreviations.☆13Apr 19, 2022Updated 4 years ago
- Github repo for the Evaluation of ChatGPT Family of Models for Biomedical Reasoning and Classification, code and data | Paper: https://ar…☆14Apr 6, 2023Updated 3 years ago
- [SIGIR24] Pre-training with Bag-of-Word Prediction for Dense Passage Retrieval☆18Feb 29, 2024Updated 2 years ago
- Knowledge Graph based Question Answering benchmark.☆10Feb 1, 2020Updated 6 years ago
- Machine reading comprehension on clinical case reports☆154Aug 28, 2025Updated last year
- Resources for our IJCAI 2020 paper, TopicKA: Generating Commonsense Knowledge-Aware Dialogue Responses Towards the Recommended Topic Fact☆12Nov 30, 2020Updated 5 years ago