calthaus / ncov-cfrLinks
R code and documentation to estimate case fatality ratio of COVID-19 from cases outside China
☆90Updated 5 years ago
Alternatives and similar repositories for ncov-cfr
Users that are interested in ncov-cfr are comparing it to the libraries listed below
Sorting:
- Accompanying code for: Kucharski AJ, Russell TW et al. Early dynamics of transmission and control of COVID-19: a mathematical modelling s…☆71Updated 3 years ago
- Temporal variation in transmission during the COVID-19 outbreak☆109Updated 2 months ago
- Scenario analyses for COVID-19 outbreak in the United Kingdom☆66Updated 5 years ago
- Repository for all scripts required to replicate the CFR analysis for paper submission.☆71Updated 5 years ago
- R package for "Epidemics: Models and data using R"☆55Updated 3 years ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 3 years ago
- Derive social mixing matrices from survey data.☆43Updated this week
- Gallery of Network-Based Epidemic Model Templates for EpiModel☆55Updated last year
- Estimating the incubation time of the novel coronavirus (nCoV-2019) based on traveler data using coarse data tools☆55Updated 5 years ago
- National and subnational estimates of the time-varying reproduction number for Covid-19☆34Updated 2 months ago
- Guidelines and forecasts for a collaborative U.S. influenza forecasting project.☆39Updated 5 years ago
- A tool to estimate time varying instantaneous reproduction number during epidemics☆102Updated this week
- analyses related to nCoV-2020 outbreak☆33Updated 5 years ago
- An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…☆37Updated 3 years ago
- epidemia package☆49Updated 3 years ago
- An R experiment about Voronoi tesselation to create colored mandalas☆50Updated 7 years ago
- A collection of RStudio style cheatsheets for the Stan ecosystem☆58Updated 5 years ago
- outbreaks: an R package compiling disease outbreak data☆52Updated 3 years ago
- Extended documentation and model examples for rethinking R package☆34Updated 8 years ago
- R package to model Covid-19 outbreaks using branching processes☆54Updated 2 years ago
- Easy Handling Discrete Time Markov Chains☆109Updated this week
- Source files for building the IDM EMOD disease transmission model.☆105Updated this week
- Preprints from the BDI Pathogen Dynamics team regarding digital contact tracing and other non-pharmaceutical interventions for Covid-19. …☆101Updated 4 years ago
- A document that introduces Bayesian data analysis.☆86Updated 3 years ago
- COVerAGE-DB: COVID-19 cases, deaths, and tests by age and sex☆58Updated 2 years ago
- Matrix Functions for Teaching and Learning Linear Algebra and Multivariate Statistics☆71Updated 4 months ago
- SEIR transmission model of COVID-19. Documentation at:☆51Updated last year
- ☆89Updated 5 years ago
- Video lectures, slides and code for "The Mathematics and Statistics of Infectious Disease Outbreaks" course at Stockholm University☆36Updated 5 years ago
- SEIR model for COVID-19 infection, including different clinical trajectories of infection☆195Updated 5 years ago