HopkinsIDD / ncov_incubation
Estimating the incubation time of the novel coronavirus (nCoV-2019) based on traveler data using coarse data tools
☆57Updated 4 years ago
Alternatives and similar repositories for ncov_incubation:
Users that are interested in ncov_incubation are comparing it to the libraries listed below
- FluSight Forecast Submissions☆18Updated 8 months ago
- Accompanying code for: Kucharski AJ, Russell TW et al. Early dynamics of transmission and control of COVID-19: a mathematical modelling s…☆71Updated 2 years ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated last year
- R package for deriving social mixing matrices from survey data.☆38Updated last month
- Age-structured SEIR model for COVID-19 outbreak in Wuhan, China☆40Updated 4 years ago
- Study on estimating incubation period distribution and other epidemiological parameters for a novel coronavirus disease (COVID-19)☆14Updated 4 years ago
- Guidelines and forecasts for a collaborative U.S. influenza forecasting project.☆38Updated 4 years ago
- ☆29Updated last month
- R package for statistical inference using partially observed Markov processes☆114Updated this week
- Analysis code and data for COVID-19 age-specific clinical fraction☆22Updated 4 years ago
- An R package with Dynamic Models of infectious diseases☆29Updated 2 months ago
- Data and code for COVID-19 NPI effectiveness estimation.☆30Updated 3 years ago
- The IHME Covid-19 Statistical deaths model☆16Updated 2 years ago
- Teaching materials for MCMC I module in the Summer Institute in Statistics and Modeling in Infectious Diseases (SISMID)☆24Updated 3 years ago
- Hikma Health COVID-19 US County Policy Dataset☆18Updated last year
- SEIR transmission model of COVID-19. Documentation at:☆51Updated 11 months ago
- ☆88Updated 4 years ago
- A tool to estimate time varying instantaneous reproduction number during epidemics☆95Updated 4 months ago
- Code to test Rt estimates against synthetic data☆17Updated 4 years ago
- Basic Epidemic, Activity, and Response COVID-19 model☆31Updated 4 years ago
- R code and documentation to estimate case fatality ratio of COVID-19 from cases outside China☆90Updated 4 years ago
- Bayesian modeling of COVID-19☆31Updated 2 years ago
- COVID-19 Pandemic Data R Package☆41Updated 4 years ago
- ☆99Updated last year
- Repository for all scripts required to replicate the CFR analysis for paper submission.☆71Updated 4 years ago
- ☆40Updated 6 months ago
- Data and Codebook for the HIT-COVID Project☆21Updated 3 years ago
- An open API for epidemiological data.☆102Updated this week
- Extended state-space SIR epidemiological models☆75Updated 3 years ago
- Contemporary statistical inference for infectious disease models using Stan☆15Updated 5 years ago