broadinstitute / rawlsLinks
Rawls service for DSDE
☆26Updated this week
Alternatives and similar repositories for rawls
Users that are interested in rawls are comparing it to the libraries listed below
Sorting:
- ☆31Updated last week
- Notebook service☆44Updated this week
- workbench identity and access management☆42Updated this week
- Bioinformatics for the Scala programming language☆112Updated 3 months ago
- A scala based DSL and framework for writing and executing bioinformatics pipelines as Directed Acyclic GRaphs☆69Updated 3 years ago
- Load genomic BAM files using Apache Spark☆21Updated 7 years ago
- Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.☆41Updated 10 months ago
- A Variant Caller, Distributed. Apache 2 licensed.☆71Updated 6 years ago
- Efficient, distributed downloads of large files from S3 to HDFS using Spark.☆17Updated 8 years ago
- FireCloud user interface for web browsers.☆19Updated 3 months ago
- An argument parsing library for Scala☆11Updated last month
- BigBWA is a new tool that uses the Big Data technology Hadoop to boost the performance of the Burrows–Wheeler aligner (BWA).☆31Updated 3 years ago
- A scalable genome browser. Apache 2 licensed.☆126Updated 3 years ago
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Updated 9 years ago
- An open-source toolkit for large-scale genomic analysis☆292Updated 3 weeks ago
- MaRe leverages the power of Docker and Spark to run and scale your serial tools in MapReduce fashion.☆14Updated 3 years ago
- ☆15Updated 8 months ago
- Parallel Genomic Analysis Toolkit☆14Updated 6 years ago
- Spark-based variant calling, with experimental support for multi-sample somatic calling (including RNA) and local assembly☆85Updated 7 years ago
- SparkBWA is a new tool that exploits the capabilities of a Big Data technology as Apache Spark to boost the performance of one of the mos…☆69Updated 6 years ago
- ☆14Updated 4 months ago
- Efficient variant-call data storage and retrieval library using the TileDB storage library.☆99Updated this week
- Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework☆72Updated 3 years ago
- WDL tools for parsing, type-checking, and more☆27Updated 3 months ago
- Ready-to-go Parquet-formatted public 'omics datasets☆30Updated 10 years ago
- ☆21Updated 6 years ago
- A fast, parallel, streaming multipart uploader for S3☆14Updated 8 years ago
- Web user interface for the Terra platform☆54Updated this week
- Models and APIs for Genomic data. RETIRED 2018-01-24☆220Updated 3 years ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 5 years ago