python wrapper to submit jobs to bsub (and later qsub)
☆44Nov 12, 2021Updated 4 years ago
Alternatives and similar repositories for bsub
Users that are interested in bsub are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A python script to obtain XYG3-type doubly hybrid (xDH) results using the standard Gaussian xx package (xx=03, 09 and/or 16)☆15Sep 21, 2022Updated 3 years ago
- Lightweight Python interfaces for reading, writing, and querying genomic regions (BED)☆15Mar 27, 2026Updated last month
- ⚛️ A Python library and a command-line tool that creates input files for computational chemistry packages☆18Aug 28, 2019Updated 6 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- Benchmarking variant calling in polyploids☆16Nov 26, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Tools to gather evidence for structural variation via breakpoint detection.☆20Mar 27, 2026Updated last month
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆22Apr 25, 2025Updated last year
- Samwell: a python package for using genomic files... well☆20Jun 28, 2022Updated 3 years ago
- Learning Machine Learning☆13Aug 24, 2023Updated 2 years ago
- Python package for cancer early detection based on a model of cancer evolution and circulating tumor DNA (ctDNA) shedding☆13Jan 8, 2021Updated 5 years ago
- ☆12Oct 21, 2018Updated 7 years ago
- Location for the LSF Python wrapper for controlling all things LSF☆114Mar 27, 2026Updated last month
- a collection of tools to do tangle in rust☆24Jul 24, 2019Updated 6 years ago
- pangenome analyses for complete genomes of great apes (and gibbon)☆20Oct 12, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A ready-to-use energy diagram drawing program☆13Nov 23, 2023Updated 2 years ago
- CHEM331 - Physical Chemistry I☆11Dec 4, 2017Updated 8 years ago
- An Expectation-Maximization algorithm to infer mutational signatures☆27Nov 16, 2016Updated 9 years ago
- An HLA star-calling tool for PacBio HiFi data types☆23Feb 26, 2025Updated last year
- ☆11Jun 26, 2022Updated 3 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Aug 18, 2020Updated 5 years ago
- Generate random test data for bioinformatics☆27Jun 17, 2024Updated last year
- High-Throughput Computational Physics Framework☆13Oct 25, 2017Updated 8 years ago
- Parallel Computational Chemistry Application☆18Aug 31, 2017Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 5 months ago
- add true-negative SVs from a population callset to a truth-set.☆14Jun 17, 2022Updated 3 years ago
- horizontal pileup☆16Nov 11, 2022Updated 3 years ago
- Quality of life improvements for Bioinformatics in Python.☆32Apr 29, 2026Updated last week
- This is a series of scripts on the rapid construction of target interval consensus sequences from bam files and the rapid construction of…☆17Jan 12, 2024Updated 2 years ago
- Connect to a LSF main node directly or trough a ssh jump node, launch a jupyter notebook via bsub and open automatically a tunnel. The n…☆20Oct 27, 2021Updated 4 years ago
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated 9 months ago
- ☆10Dec 12, 2017Updated 8 years ago
- Phased structural variant discovery in pangenomes☆42Apr 20, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- LBFGS optimization algorithm ported from liblbfgs☆12Nov 25, 2022Updated 3 years ago
- Compute a pairwise SNP distance matrix from one or two alignment(s)☆26Sep 12, 2024Updated last year
- A small, auxiliary index to massively improve parallel fastq parsing☆32Mar 6, 2026Updated 2 months ago
- experiments and tests made for old computers☆17May 8, 2025Updated last year
- ☆29Aug 7, 2025Updated 9 months ago
- Robust individual and aggregate checksums for nucleotide sequences☆17Mar 3, 2026Updated 2 months ago
- Python program to generate NetworkX graphs from segmented images.☆14Apr 14, 2023Updated 3 years ago