bittremieux-lab / falcon
Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
☆27Updated 3 weeks ago
Alternatives and similar repositories for falcon:
Users that are interested in falcon are comparing it to the libraries listed below
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆40Updated 3 months ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆44Updated 6 months ago
- Ms2 basEd saMple vectOrization (memo) package☆17Updated last year
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆18Updated 4 months ago
- ☆16Updated 2 years ago
- ☆23Updated last week
- A small library to provide peak picking for software processing mass spectrometry data☆21Updated 4 months ago
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆25Updated 4 months ago
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆43Updated 2 weeks ago
- The Multiplierz Proteomics Library☆24Updated 11 months ago
- A package to cluster and visualise MS/MS spectral data☆11Updated 4 years ago
- ☆32Updated last month
- TidyMS: Tools for working with MS data in untargeted metabolomics☆55Updated 8 months ago
- a python package for molecular formula analysis in MS-based small molecule studies☆25Updated last month
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆20Updated 2 months ago
- Streamlining Mass Spectrometry Data Visualization with Pandas☆13Updated last week
- ☆17Updated 10 months ago
- ☆20Updated last year
- BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)☆17Updated last year
- Spectral entropy for mass spectrometry data.☆24Updated 3 weeks ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated this week
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Updated 9 months ago
- A library for deisotoping and charge state deconvolution of complex mass spectra☆35Updated 2 months ago
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆28Updated 3 months ago
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆24Updated last month
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆46Updated this week
- Democratizing ML in proteomics☆34Updated this week
- Molecular formula discovery via bottom-up MS/MS interrogation☆13Updated 7 months ago
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆60Updated 3 weeks ago