hiteshpatel379 / PyWATERLinks
☆13Updated 7 years ago
Alternatives and similar repositories for PyWATER
Users that are interested in PyWATER are comparing it to the libraries listed below
Sorting:
- PCA and normal mode analysis of proteins☆20Updated last year
- Python script that creates 2D protein-ligand interaction images☆14Updated 7 years ago
- Protocols and tools to run (automated) atomistic simulations of enzyme-ligand systems☆21Updated 4 years ago
- ☆15Updated 7 years ago
- The code for the QuickVina homepage.☆36Updated 3 years ago
- Dynamics PyMOL Plugin☆47Updated last year
- Contact map analysis for biomolecules; based on MDTraj☆48Updated 2 weeks ago
- GaudiMM: A modular optimization platform for molecular design☆32Updated last year
- PyMOL Plugin for displaying polar contacts☆18Updated 6 years ago
- MMTSB Tool Set☆33Updated 2 weeks ago
- Utilities to assist with Amber Molecular Dynamics structure preparation and MMPBSA.py energy methods☆19Updated 6 years ago
- MD pharmacophores and virtual screening☆34Updated 2 years ago
- An MPI based parallel implementation of Autodock Vina☆17Updated 5 years ago
- Parallelized Open Babel & Autodock suite Pipeline☆24Updated 7 years ago
- ☆14Updated 7 months ago
- protein docking using a density-based descriptor for atoms charge and dynamics☆14Updated 3 years ago
- A parallel molecular docking program based on AutoDock Vina☆19Updated 4 months ago
- Collection of Python scripts to setup and run simulations with OpenMM☆17Updated 5 years ago
- Python code to automatically interact with PDBePISA web server☆10Updated 3 years ago
- ☆32Updated 9 months ago
- Autodock/Vina plugin for PyMol by Daniel Seeliger☆28Updated 8 years ago
- Protocols for running MD simulations in Gromacs☆10Updated last year
- A Python toolkit to compute molecular features and predict activities and properties of small molecules☆21Updated 4 years ago
- LIGSIFT: An open-source tool for ligand structural alignment and virtual screening☆15Updated 7 years ago
- McDock: Simple Monte Carlo docking algorithm in C++☆10Updated 9 years ago
- A repo for analysis of ensembles of protein-ligand complexes☆30Updated 2 weeks ago
- Code to accompany "Practical Cheminformatics With Open Source Software"☆16Updated 3 years ago
- Elastic Network Contact Model (coarse-grained Normal Mode Analysis software)☆14Updated 8 years ago
- ☆10Updated 7 years ago
- Predict allosteric pockets on proteins☆15Updated 3 years ago