Alternatives and similar repositories for All-Modules-Archive

Users that are interested in All-Modules-Archive are comparing it to the libraries listed below

• SISBID / Data-Wrangling
  Teaching material for Summer Institute in Statistics for Big Data Module 1.
  ☆64Updated 2 weeks ago
• SISBID / Supervised-Learning
  ☆54Updated 3 weeks ago
• SISBID / Data-Visualization
  Materials for Module 2 of the SISBID Workshop, Visualization of Biomedical Big Data
  ☆26Updated 8 years ago
• SISBID / Unsupervised-Learning
  ☆52Updated last month
• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆41Updated 8 months ago
• SISBID / Reproducible-Research
  Materials for Module 3 of the SISBID Workshop, Reproducible Research
  ☆63Updated 8 years ago
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆44Updated last month
• davetang / machine_learning
  Machine learning in R
  ☆33Updated 9 months ago
• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆56Updated 3 months ago
• const-ae / tidygenomics
  Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/
  ☆104Updated 4 years ago
• nicolaroberts / hdp
  R pkg for Hierarchical Dirichlet Process
  ☆79Updated 2 years ago
• RTCGA / RTCGA
  Download, integration and visualizations of the variety & volume of TCGA data.
  ☆51Updated 2 years ago
• stephaniehicks / classroomNotes
  Notes on academic-related things
  ☆27Updated 6 years ago
• stephenslab / mashr
  An R package for multivariate adaptive shrinkage.
  ☆92Updated 9 months ago
• isb-cgc / examples-R
  Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.
  ☆31Updated 7 years ago
• aedin / PCAworkshop
  An introduction to matrix factorization and PCA and SVD.
  ☆41Updated last year
• lcolladotor / derfinder
  Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches
  ☆44Updated 8 months ago
• js229 / Vennerable
  Vennerable provides Venn diagrams in R. It displays Venn and Euler diagrams for up to 9 different sets and using a variety of geometries.…
  ☆91Updated 4 years ago
• stephaniehicks / qsmooth
  Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…
  ☆52Updated 2 years ago
• kevinblighe / RegParallel
  Standard regression functions in R enabled for parallel processing over large data-frames.
  ☆38Updated last year
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆73Updated last week
• JEFworks-Lab / genomic-data-visualization-2024
  Course website for Genomic Data Visualization 2024
  ☆26Updated last year
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆75Updated 2 years ago
• alyssafrazee / RSkittleBrewer
  for those times you want to make plots with candy-themed color schemes
  ☆57Updated 5 years ago
• Shians / Glimma
  Glimma R package
  ☆50Updated 11 months ago
• friend1ws / pmsignature
  R package for extracting mutation signatures from a list of somatic mutations
  ☆37Updated 6 years ago
• csoneson / countsimQC
  countsimQC - Compare characteristic features of count data sets
  ☆28Updated last month
• omicsCore / SEQprocess
  SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package
  ☆17Updated 5 years ago
• mikelove / asthma
  RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)
  ☆19Updated 7 years ago
• seandavi / Bioc2017BigDataWorkshopSession
  Tutorial for working with cloud infrastructure and AWS from R
  ☆20Updated 8 years ago