Alternatives and similar repositories for structural-pipeline:

Users that are interested in structural-pipeline are comparing it to the libraries listed below

• NIST-MNI / nist_mni_pipelines
  NIST-MNI image processing pipelines
  ☆10Updated 2 weeks ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆72Updated 4 months ago
• dmritrekker / trekker
  dMRI based fiber tracking using parallel transport tractography
  ☆26Updated last month
• Deep-MI / BrainPrint-legacy
  Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)
  ☆20Updated 4 years ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆55Updated 6 months ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆67Updated this week
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 5 months ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆35Updated 2 weeks ago
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆92Updated last month
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated 9 months ago
• freesurfer / surfa
  Python utilities for medical image and surface-based analysis
  ☆29Updated last week
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆76Updated 4 years ago
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆66Updated this week
• NYU-DiffusionMRI / DESIGNER-v1
  Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline
  ☆51Updated last year
• raamana / graynet
  Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)
  ☆37Updated 11 months ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆47Updated 2 weeks ago
• spinicist / nanslice
  A Python implementation of 'dual-coding'
  ☆41Updated 11 months ago
• Diffusion-MRI / awesome-preclinical-diffusion-mri
  ☆17Updated last year
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆77Updated this week
• neurolabusc / NiiStat
  NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations
  ☆31Updated 4 years ago
• ntustison / CrossLong
  Nature is a language---can't you read?
  ☆11Updated 3 years ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆67Updated last year
• JosePMarques / MP2RAGE-related-scripts
  MP2RAGE Scripts - T1 map correction & Background noise removal
  ☆57Updated 2 years ago
• daducci / COMMIT
  Linear framework to combine tractography and tissue micro-structure estimation with diffusion MRI
  ☆47Updated 3 weeks ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆60Updated 3 months ago
• nipreps / nibabies
  fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI
  ☆29Updated this week
• NYU-DiffusionMRI / SMI
  Toolbox for parameter estimation of the Standard Model of diffusion in white matter
  ☆23Updated 3 weeks ago
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆94Updated 3 weeks ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆51Updated this week
• caseypaquola / BigBrainWarp
  BigBrainWarp
  ☆23Updated 9 months ago