animgoeth / ARA-CNN
☆25Updated last year
Related projects ⓘ
Alternatives and complementary repositories for ARA-CNN
- Data and code to accompany our Nature publication☆43Updated 2 years ago
- HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings…☆27Updated 2 years ago
- A set of codes to classify H&E slides using deep learning☆28Updated 2 years ago
- Repo for Tang et al, bioRxiv 454793 (2018)☆38Updated 5 years ago
- This repository contains the implementation of TILAb-score as described in the original paper.☆17Updated 5 years ago
- Survival Convolutional Neural Networks☆68Updated last year
- A tool for rapidly labeling objects using deep learning feature embedding☆27Updated 2 months ago
- Whole Slide Digital Pathology Image Tissue Localization☆44Updated last year
- Syntax - the arrangement of whole-slide-images and their image tiles to create well-formed computational pathology pipelines.☆55Updated last year
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆24Updated 4 years ago
- A human in the loop solution to machine learning for pathologists (easy semantic segmentation of WSI)☆51Updated 4 years ago
- Python 3 library for the augmentation & normalization of H&E images☆51Updated 2 years ago
- Handling whole-slide images with region-level annotations.☆9Updated 5 years ago
- ☆23Updated 4 years ago
- HistoSegNet: Semantic Segmentation of Histological Tissue Type in Whole Slide Images (ICCV 2019)☆87Updated 4 years ago
- A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…☆21Updated 2 years ago
- DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep …☆36Updated 3 years ago
- Intelligent data partitioning using quality control metrics☆16Updated 6 months ago
- ☆43Updated last year
- Corresponding code of 'Quiros A.C., Murray-Smith R., Yuan K. Pathology GAN: Learning deep representations of cancer tissue. Proceedings o…☆92Updated 3 years ago
- Pretrained model for self supervised histopathology☆108Updated 2 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆52Updated last year
- Full package for applying deep learning to virtual slides.☆67Updated 6 years ago
- ☆18Updated 5 years ago
- Corresponding code of 'Quiros, A. C., Coudray, N., Yeaton, A., Sunhem, W., Murray-Smith, R., Tsirigos, A., Yuan, K. Adversarial learning …☆15Updated 2 years ago
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆75Updated last year
- A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.☆79Updated 2 years ago
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆34Updated this week
- A Python library for deep learning on whole-slide images☆50Updated 3 years ago
- An open-source digital pathology based rapid image annotation tool☆74Updated this week