keiserlab / plaquebox-paperLinks
Repo for Tang et al, bioRxiv 454793 (2018)
☆41Updated 6 years ago
Alternatives and similar repositories for plaquebox-paper
Users that are interested in plaquebox-paper are comparing it to the libraries listed below
Sorting:
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆67Updated 8 months ago
- Pathway-based sparse deep neural network for survival analysis☆38Updated last year
- Data and code to accompany our Nature publication☆46Updated 3 years ago
- Survival Convolutional Neural Networks☆68Updated 2 years ago
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆23Updated 4 years ago
- This repository contains the implementation of TILAb-score as described in the original paper.☆18Updated 5 years ago
- A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data☆18Updated 5 years ago
- A set of codes to classify H&E slides using deep learning☆30Updated 3 years ago
- Pathology image classifier architecture☆13Updated 5 years ago
- ☆48Updated 3 years ago
- Deep Learning with Multimodal Representation for Pancancer Prognosis Prediction☆88Updated 6 years ago
- ☆47Updated 8 years ago
- A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…☆24Updated 3 years ago
- ☆45Updated 2 years ago
- predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer☆104Updated 5 years ago
- ☆14Updated 4 years ago
- ☆26Updated 2 years ago
- First commit☆62Updated 2 years ago
- Python scripts for automatic Whole-Slide Image preprocessing.☆36Updated 4 years ago
- Machine learning methods for spatially resolved transcriptomics with histology images: a collection of related resources.☆10Updated 3 years ago
- Re-stained whole slide image alignment☆33Updated last year
- ☆71Updated 4 years ago
- [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…☆25Updated last year
- ☆55Updated 3 years ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆77Updated 4 years ago
- Multimodal deep learning model for long-term cancer survival prediction☆81Updated 3 years ago
- Scripts for data processing☆43Updated last year
- A pan-cancer platform for mutation prediction from routine histology☆68Updated 4 years ago
- AI-based molecular classification of diffuse gliomas using rapid, label-free optical imaging☆32Updated 2 years ago
- ☆11Updated 6 years ago