Calculating a range of protein descriptors using their physicochemical, biological and structural properties π¬.
β17Apr 7, 2026Updated 3 weeks ago
Alternatives and similar repositories for protPy
Users that are interested in protPy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python package for AAIndex database (https://www.genome.jp/aaindex/)β14Apr 6, 2026Updated 3 weeks ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.β117Sep 4, 2025Updated 7 months ago
- EnzyMM - Enzyme Motif Miner - Geometric matching of catalytic motifs in protein structures.β38Apr 15, 2026Updated 2 weeks ago
- Software for predicting translation initiation rates in bacteriaβ33Jul 30, 2025Updated 9 months ago
- Python generic modular semi-automated platform containing functions for the classification of proteins based on their physicochemical proβ¦β35Sep 4, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Some scoring functions for predicting the effects of mutations on protein sequences using ESM-2β11Dec 10, 2023Updated 2 years ago
- plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 styleβ17Dec 19, 2025Updated 4 months ago
- Expert-Guided Protein Language Models enable Accurate and Blazingly Fast Fitness Predictionβ17Feb 6, 2026Updated 2 months ago
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"β13Apr 2, 2023Updated 3 years ago
- AntiRef: reference clusters of human antibody sequencesβ12Apr 18, 2024Updated 2 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequenceβ67Apr 2, 2025Updated last year
- Fundamental functions, annotation pipeline and constants for oktoberfestβ13Updated this week
- Convert raw AAIndex data into Python-friendly, ready-to-use dataframesβ11Mar 19, 2020Updated 6 years ago
- Secondary Protein Structure Prediction using Neural Networks and Deep Learning .β10Jul 17, 2022Updated 3 years ago
- Virtual machines for every use case on DigitalOcean β’ AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Prediction pipeline to generate prognosis predictors for Ebola Virus Diseaseβ12Feb 22, 2016Updated 10 years ago
- MM/PBSA binding free energy calculationβ22May 31, 2024Updated last year
- Fragment Linker Prediction Using Deep Encoder-Decoder Network for PROTAC Drug Designβ12Oct 2, 2023Updated 2 years ago
- β12Jan 14, 2023Updated 3 years ago
- β11Apr 11, 2023Updated 3 years ago
- β15Aug 26, 2024Updated last year
- The official implementation of the paper "MotifRetro: Exploring the Combinability-Consistency Trade-offs in retrosynthesis via Dynamic Moβ¦β11Jun 25, 2023Updated 2 years ago
- This repository gathers the SchNet4AIM code along with some instructions and readme files.β15Mar 13, 2024Updated 2 years ago
- Official implementation of DrugGEN in PyTorchβ12Oct 27, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Some scripts that I keep using over and over.β21Jul 5, 2025Updated 9 months ago
- β97Dec 30, 2025Updated 4 months ago
- MolKGNN is a deep learning model for predicting biological activity or molecular properties. It features in 1. SE(3)-invariance 2. conforβ¦β14Jan 22, 2024Updated 2 years ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity modelsβ43Jun 28, 2021Updated 4 years ago
- A deep learning-based predictor of enzyme optimal pHβ8Jun 25, 2025Updated 10 months ago
- Multi-Species Codon Optimization Engineβ28Jul 16, 2025Updated 9 months ago
- β23Jun 24, 2022Updated 3 years ago
- Physico-chemical and biological property prediction for small moleculesβ12May 3, 2022Updated 3 years ago
- DL model to predict HLA peptide presentationβ16Jan 31, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits β’ AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- An official Molecule Transformer Drug Target Interaction (MT-DTI) modelβ35Nov 6, 2020Updated 5 years ago
- Pocket-Oriented Elaboration of Molecules: application to CDK8 inhibitionβ14Dec 30, 2022Updated 3 years ago
- Weighing Black Holes ππ€β13Aug 17, 2021Updated 4 years ago
- Fast, state-of-the-art ab initio prediction of protein secondary structure in 3 and 8 classesβ47May 21, 2020Updated 5 years ago
- DTI prediction methodβ24Jan 22, 2024Updated 2 years ago
- β10Mar 7, 2024Updated 2 years ago
- Code to analyze the data from DNA-encoded libraries (DELs)β11Jul 12, 2023Updated 2 years ago