sysbio-curie / RomaLinks
Representation of Module Activity
☆10Updated 8 years ago
Alternatives and similar repositories for Roma
Users that are interested in Roma are comparing it to the libraries listed below
Sorting:
- Identify major cellular signals in bulk transcriptomes☆11Updated 3 years ago
- ☆27Updated 11 months ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆29Updated 5 months ago
- ☆10Updated 4 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- Repository of "Personalization of Logical Models With Multi-Omics Data Allows Clinical Stratification of Patients" paper☆11Updated 2 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 7 years ago
- CAusal Reasoning for Network Identification with integer VALue programming in R☆59Updated last year
- ARCHS4 RNA-seq processing scripts and web server pages.☆59Updated 4 years ago
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- A Python package for jointly analyzing multimodal single-cell sequencing data☆24Updated 8 months ago
- Code for "Single cell transcriptomes from human kidneys reveal the cellular identity of renal tumours"☆26Updated 7 years ago
- A continually expanding collection of RNA-seq tools☆51Updated 11 months ago
- ☆13Updated 2 months ago
- scNMT-seq gastrulation☆42Updated 2 years ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆36Updated 3 years ago
- ☆19Updated 3 years ago
- R package for the analysis of single-cell immune repertoires☆43Updated 7 months ago
- epigenome analysis to rank transcription factors☆31Updated 2 years ago
- Data and analysis for the Splatter paper☆29Updated 7 years ago
- ☆35Updated 6 months ago
- MultiMAP for integration of single cell multi-omics☆56Updated last year
- Fast motif matching in R☆46Updated last year
- 🏺 Exploring novel tumor epitope identification☆36Updated 4 years ago
- Hierarchical HotNet is an algorithm for finding hierarchies of active subnetworks.☆38Updated 5 years ago
- Rails/Docker application for the Broad Institute's single cell RNA-seq data portal☆68Updated last week
- Data Integration tool utilizing network information for predictive analyses☆16Updated 4 months ago
- Using BCR and expression for sequence embedding☆25Updated last week
- A repository for the design and analysis of pooled single cell RNA-seq perturbation experiments.☆95Updated 6 years ago
- A guide to using the Python scRNA-seq analysis package Scanpy from R☆15Updated 5 years ago